CisBP motif

M04479_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 18 positions

Position	A	C	G	T
1	0.4890	0.2103	0.2247	0.0760
2	0.2458	0.2527	0.0391	0.4624
3	0.0000	0.0015	0.0000	0.9985
4	0.0025	0.0000	0.9975	0.0000
5	0.9532	0.0360	0.0017	0.0091
6	0.0002	0.0015	0.0000	0.9983
7	0.2353	0.0795	0.3082	0.3770
8	0.3669	0.2643	0.2631	0.1056
9	0.0095	0.7143	0.0272	0.2491
10	0.0020	0.9875	0.0023	0.0083
11	0.0046	0.9939	0.0007	0.0008
12	0.8032	0.0708	0.0794	0.0466
13	0.1772	0.4407	0.0955	0.2867
14	0.1045	0.6808	0.0535	0.1612
15	0.0016	0.8433	0.0004	0.1547
16	0.0498	0.0445	0.0439	0.8618
17	0.5389	0.1061	0.2472	0.1079
18	0.1610	0.4179	0.1115	0.3095

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q6AZW8	Known		zf-C2H2_4,zf-C2H2,YEATS,Zn_ribbon_recom,C1_3,zf-C2H2_jaz,YhfH,XPA_N,zf-met,zf-H2C2_2,Yippee,C1_1,MBD,A2L_zn_ribbon,C1_4,TFIIS_C,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,C1_2,Prok-RING_1,ZZ,DZR,LIM,DNA_RNApol_7kD,zf-BED,zf-trcl,CxxC_CxxC_SSSS,DUF164,CpXC,zf-LYAR,BolA