ModCRE DB

Human transcription-factor motif and 3D-model database

ModCREDB

Search human TF sequence records, motif predictions, generated PWMs, and TF-DNA 3D models.

Start with a gene, UniProt accession, motif ID, source, prediction level, or example entry.

5267TFs
5267UniProt annotations
117290TF-motif links
26330local MEME files
148253D models
7700model summary rows

Example entries

Browse all
TF Gene / protein Primary prediction Families Motifs 3D models
A0PJY2 FEZF1 FEZ ZNF312B
Fez family zinc finger protein 1 (Zinc finger protein 312B)
Identical_PWM zf-C2H2_4,zf-RING_3,zf-C2H2,zf-C2H2_jaz,zf-C3HC4_2,zf-CHY,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,HypA,zf-Sec23_Sec24,GAGA,Zn_Tnp_IS1595,DZR,FYDLN_acid,zf-C2H2_6 3 1
Q16124 HOX B6
Homeobox protein Hox-B7
Homologous_PWM Homeobox,DUF2209 148 1
A0A0S2Z4K5 PPARG
Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3)
Relatively_Homologous_PWM PPARgamma_N,Hormone_recep,zf-C4 104 39
A0A1W2PPM1 CPHXL CPHX1
Cytoplasmic polyadenylated homeobox-like protein (Cytoplasmic polyadenylated homeobox 1)
ModCRE
Source: Homology model
Homeobox,Homeobox_KN,CPSF73-100_C 21 33
A0A087WUK2 HNRNPDL
Heterogeneous nuclear ribonucleoprotein D-like
ModCRE
Source: AlphaFold3 model
RRM_1,NID,RRM_6,CBFNT,RRM_3,RRM_5 6 6

About this release: 5267 UniProt TF sequence records. View documentation.