JASPAR motif

MA0597.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 9 positions

Position	A	C	G	T
1	0.0905	0.4673	0.1357	0.3065
2	0.0754	0.2362	0.0603	0.6281
3	0.1005	0.0000	0.6884	0.2111
4	0.0352	0.9146	0.0000	0.0503
5	0.0151	0.9799	0.0000	0.0050
6	0.2915	0.6834	0.0050	0.0201
7	0.2362	0.0854	0.3869	0.2915
8	0.1508	0.3568	0.2060	0.2864
9	0.5829	0.1709	0.0854	0.1608

TFs using this motif 3 linked TF records

1 known/direct, 1 nearest-neighbor >70%, 1 nearest-neighbor 50–70%, 0 structure-derived. Showing all 3 assignments.

TF record	Motif assignment	Identity	PFAM Families
Q9NVV9	Known		DUF4140,THAP,Phage_min_cap2,FlaC_arch,L31,DUF4391,ADIP,IncA,DUF607,DivIC,FliD_C,Mitofilin,Sec2p,GrpE,Macoilin,TMF_DNA_bd,DUF3373,Cep57_CLD,Erp_C,Atg14,DUF2951,ABC_tran_2,RTBV_P46
E9PIS9	Nearest Neighbor (>70%)	77.1%	THAP
Q8WTV1	Nearest Neighbor (50–70%)	50.5%	Pfg27,THAP