JASPAR motif

MA1127.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 11 positions

Position	A	C	G	T
1	0.1930	0.0700	0.5750	0.1620
2	0.6490	0.0870	0.2160	0.0480
3	0.0120	0.0100	0.0120	0.9660
4	0.0170	0.0100	0.8729	0.1001
5	0.9550	0.0080	0.0170	0.0200
6	0.0480	0.8851	0.0250	0.0420
7	0.0750	0.0140	0.8970	0.0140
8	0.0250	0.0570	0.0140	0.9040
9	0.2470	0.6970	0.0200	0.0360
10	0.9490	0.0160	0.0140	0.0210
11	0.0921	0.2613	0.0531	0.5936

TFs using this motif 3 linked TF records

2 known/direct, 0 nearest-neighbor >70%, 1 nearest-neighbor 50–70%, 0 structure-derived. Showing all 3 assignments.

TF record	Motif assignment	Identity	PFAM Families
P05412	Known		HAP1_N,Striatin,DivIC,PspA_IM30,TMF_DNA_bd,Jun,bZIP_Maf,FlaC_arch,bZIP_2,DUF904,Seryl_tRNA_N,Jnk-SapK_ap_N,bZIP_1,DUF3450
P53539	Known		Metal_resist,DivIC,ERM,V_ATPase_I,Uso1_p115_C,IncA,bZIP_Maf,DUF342,bZIP_2,Atg14,HALZ,Macoilin,APG6,bZIP_1
G3V289	Nearest Neighbor (50–70%)	52.2%