JASPAR motif

MA1978.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 21 positions

Position	A	C	G	T
1	0.3851	0.3041	0.0608	0.2500
2	0.2770	0.1149	0.0608	0.5473
3	0.7365	0.0878	0.0068	0.1689
4	0.6824	0.1419	0.0338	0.1419
5	0.3851	0.1419	0.1959	0.2770
6	0.2230	0.1959	0.1419	0.4392
7	0.5743	0.0878	0.2770	0.0608
8	0.1149	0.1149	0.0338	0.7365
9	0.8446	0.0068	0.1149	0.0338
10	0.8446	0.0338	0.0608	0.0608
11	0.7905	0.0878	0.0608	0.0608
12	0.1959	0.0338	0.1959	0.5743
13	0.1149	0.0338	0.8446	0.0068
14	0.3041	0.1149	0.4662	0.1149
15	0.4662	0.1959	0.1959	0.1419
16	0.1419	0.5203	0.0338	0.3041
17	0.2770	0.1419	0.1419	0.4392
18	0.7095	0.2230	0.0338	0.0338
19	0.5203	0.0338	0.1689	0.2770
20	0.1959	0.1959	0.1689	0.4392
21	0.1149	0.0338	0.0608	0.7905

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
O60765	Known		zf-C2H2_4,C1_4,zf-C2H2,Prok-RING_1,zf-BED,zf-C2H2_jaz,DNA_RNApol_7kD,KRAB,zf-met,zf-met2,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2HC_2,zf-C2H2_6,LIM,BolA