JASPAR motif

MA1978.2

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 20 positions

Position	A	C	G	T
1	0.2770	0.1150	0.0610	0.5470
2	0.7360	0.0880	0.0070	0.1690
3	0.6820	0.1420	0.0340	0.1420
4	0.3850	0.1420	0.1960	0.2770
5	0.2230	0.1960	0.1420	0.4390
6	0.5740	0.0880	0.2770	0.0610
7	0.1150	0.1150	0.0340	0.7360
8	0.8442	0.0070	0.1149	0.0340
9	0.8442	0.0340	0.0609	0.0609
10	0.7902	0.0879	0.0609	0.0609
11	0.1960	0.0340	0.1960	0.5740
12	0.1149	0.0340	0.8442	0.0070
13	0.3040	0.1150	0.4660	0.1150
14	0.4660	0.1960	0.1960	0.1420
15	0.1420	0.5200	0.0340	0.3040
16	0.2770	0.1420	0.1420	0.4390
17	0.7090	0.2230	0.0340	0.0340
18	0.5200	0.0340	0.1690	0.2770
19	0.1960	0.1960	0.1690	0.4390
20	0.1149	0.0340	0.0609	0.7902

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
O60765	Known		zf-C2H2_4,C1_4,zf-C2H2,Prok-RING_1,zf-BED,zf-C2H2_jaz,DNA_RNApol_7kD,KRAB,zf-met,zf-met2,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2HC_2,zf-C2H2_6,LIM,BolA