ModCRE DB

Predicted = Low motif

p49790.af3.2

Source: Predicted = Low

Sequence logo

Matrix 18 positions
Position A C G T
1 0.3640 0.1980 0.2170 0.2220
2 0.3790 0.2110 0.2100 0.2000
3 0.4310 0.3720 0.0510 0.1460
4 0.2430 0.1380 0.1970 0.4220
5 0.5810 0.4080 0.0020 0.0090
6 0.7080 0.2910 0.0000 0.0000
7 0.9580 0.0010 0.0400 0.0010
8 0.1430 0.0540 0.0180 0.7850
9 0.0000 0.0020 0.2020 0.7960
10 0.0070 0.2250 0.1010 0.6670
11 0.0030 0.0050 0.2340 0.7580
12 0.3750 0.1980 0.2250 0.2020
13 0.3590 0.2200 0.2000 0.2210
14 0.3790 0.2040 0.2220 0.1960
15 0.3610 0.2140 0.2090 0.2170
16 0.3820 0.2040 0.2050 0.2080
17 0.3740 0.2020 0.2060 0.2190
18 0.3470 0.2370 0.2080 0.2080
TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.

TF record Motif assignment Identity PFAM Families
P49790 AF3-derived ModCRE Nup_retrotrp_bd,Nup153,zf-RanBP
3D models 1 model
ModelTemplateResiduesActions
p49790.af3.2 View 3D Download PDB