Predicted = Low motif
p49790.af3.2
Source: Predicted = Low
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.3640 | 0.1980 | 0.2170 | 0.2220 |
| 2 | 0.3790 | 0.2110 | 0.2100 | 0.2000 |
| 3 | 0.4310 | 0.3720 | 0.0510 | 0.1460 |
| 4 | 0.2430 | 0.1380 | 0.1970 | 0.4220 |
| 5 | 0.5810 | 0.4080 | 0.0020 | 0.0090 |
| 6 | 0.7080 | 0.2910 | 0.0000 | 0.0000 |
| 7 | 0.9580 | 0.0010 | 0.0400 | 0.0010 |
| 8 | 0.1430 | 0.0540 | 0.0180 | 0.7850 |
| 9 | 0.0000 | 0.0020 | 0.2020 | 0.7960 |
| 10 | 0.0070 | 0.2250 | 0.1010 | 0.6670 |
| 11 | 0.0030 | 0.0050 | 0.2340 | 0.7580 |
| 12 | 0.3750 | 0.1980 | 0.2250 | 0.2020 |
| 13 | 0.3590 | 0.2200 | 0.2000 | 0.2210 |
| 14 | 0.3790 | 0.2040 | 0.2220 | 0.1960 |
| 15 | 0.3610 | 0.2140 | 0.2090 | 0.2170 |
| 16 | 0.3820 | 0.2040 | 0.2050 | 0.2080 |
| 17 | 0.3740 | 0.2020 | 0.2060 | 0.2190 |
| 18 | 0.3470 | 0.2370 | 0.2080 | 0.2080 |
TFs using this motif
0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| P49790 | AF3-derived ModCRE | Nup_retrotrp_bd,Nup153,zf-RanBP |
3D models
| Model | Template | Residues | Actions |
|---|---|---|---|
| p49790.af3.2 | View 3D Download PDB |