ModCRE DB

Transcription factor

A0A024R3C6 - ZBTB16

Zinc finger and BTB domain containing 16 isoform 1 (Zinc finger and BTB domain containing 16, isoform CRA_a)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 673 aa

23 Generated PWM 16 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)8
MotifPredictionSourceDNA bindingSupportLogoActions
MA1580.1 NN 70-40% JASPAR TGTACAGTAT 68.3% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 54.8% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 54.8% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 50.8% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 50.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 50.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 50.5% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 50.0% identity Open · Scan
ModCRE15
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:652_5wjq_D_1 ModCRE Homology model CCCGCGGCCGGGGCCACGCCGGGCGTCG Region 405-652 · 1 3D model Open · Scan
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:656_5v3j_E_1 ModCRE Homology model GTCCCCCCCCCCGTGTAGTCCCC Region 405-656 · 1 3D model Open · Scan
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:656_5v3m_C_1 ModCRE Homology model AGCCCCCCGGGGGCCAAGCGCCCC Region 405-656 · 1 3D model Open · Scan
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:457:600_6ml7_A_1 ModCRE Homology model CTACGGCGGCACTGGTATG Region 457-600 · 1 3D model Open · Scan
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:470:624_2i13_A_1 ModCRE Homology model GTTTACCTGCCCCTACTAAAC Region 470-624 · 1 3D model Open · Scan
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:516:624_5egb_A_1 ModCRE Homology model AGGGGTGGAGCCCGGCCC Region 516-624 · 1 3D model Open · Scan
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:516:624_5ei9_E_1 ModCRE Homology model GGGGCGGGGGCGGGGCC Region 516-624 · 1 3D model Open · Scan
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:518:624_5eh2_F_1 ModCRE Homology model GGGGGGTAGGCCGGGCCCC Region 518-624 · 1 3D model Open · Scan
TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:523:624_2jp9_A_1 ModCRE Homology model GGCGGGGCGGGGCCCGA Region 523-624 · 1 3D model Open · Scan
a0a024r3c6.af3.0 ModCRE AlphaFold3 model CCGGGGGCCCCCCCCCGGGAGGA AlphaFold3 model · ModCRE PWM Open · Scan
a0a024r3c6.af3.1 ModCRE AlphaFold3 model CGGGGGGGCGCCCCCCCGGGAGTCG AlphaFold3 model · ModCRE PWM Open · Scan
a0a024r3c6.af3.2 ModCRE AlphaFold3 model CCGGACGGGGGGGGGCCGCCGG AlphaFold3 model · ModCRE PWM Open · Scan
a0a024r3c6.af3.3 ModCRE AlphaFold3 model CCGGGGGCCCCCCCCCGGGAGGA AlphaFold3 model · ModCRE PWM Open · Scan
a0a024r3c6.af3.4 ModCRE AlphaFold3 model GACTACCGGGGCGTGCCGGGGGG AlphaFold3 model · ModCRE PWM Open · Scan
a0a024r3c6.af3.5 ModCRE AlphaFold3 model GACTCCTGGGGGGGGCCCCCCCCG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 673 aa
405-656

Region 405-656 9 PWM

Residues
252 aa
Domains
PF13912 · C2H2-type zinc finger PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
10 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2JP9, 5EGB, 5EH2, 5EI9, 5V3J, 5V3M, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
16 active PDB models 6 summary rows
Region 405-65610 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0A024R3C6_A0A024R3C6_HUMAN:572:610_1llm_D_1 1llm 572-610 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:652_5wjq_D_1 5wjq 405-652 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:656_5v3j_E_1 5v3j 405-656 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:656_5v3m_C_1 5v3m 405-656 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:457:600_6ml7_A_1 6ml7 457-600 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:470:624_2i13_A_1 2i13 470-624 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:516:624_5egb_A_1 5egb 516-624 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:516:624_5ei9_E_1 5ei9 516-624 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:518:624_5eh2_F_1 5eh2 518-624 View model · PDB
Predicted = Low TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:523:624_2jp9_A_1 2jp9 523-624 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 405:657 572,572 610,610 P:C,D · DNA:A,B 48.7% / 64.1% 44,45 View · PDB DIMER_tr_A0A024R3C6_A0A024R3C6_HUMAN:572:610_1llm_D_1
4 2i13 405:657 470 624 P:A · DNA:C,D 42.6% / 56.1% 100 View · PDB TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:470:624_2i13_A_1
5 6ml7 405:657 457 600 P:A · DNA:E,F 38.2% / 61.1% 100 View · PDB TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:457:600_6ml7_A_1
1 5wjq 405:657 405 652 P:D · DNA:A,B 36.7% / 54.8% 87 View · PDB TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:652_5wjq_D_1
2 5v3m 405:657 405 656 P:C · DNA:A,B 34.5% / 52.8% 90 View · PDB TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:656_5v3m_C_1
3 5v3j 405:657 405 656 P:E · DNA:A,B 34.5% / 52.8% 90 View · PDB TFS_tr_A0A024R3C6_A0A024R3C6_HUMAN:405:656_5v3j_E_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a024r3c6.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a024r3c6.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a024r3c6.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a024r3c6.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a024r3c6.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a024r3c6.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
25-124PF00651BTB/POZ domainNo overlap with loaded model regions
460-483PF13912C2H2-type zinc fingeroverlaps 405-656
518-540PF13912C2H2-type zinc fingeroverlaps 405-656
546-568PF00096Zinc finger, C2H2 typeoverlaps 405-656
574-596PF00096Zinc finger, C2H2 typeoverlaps 405-656