ModCRE DB

Transcription factor

A0A087WUK4 - NR2C1

Nuclear receptor subfamily 2 group C member 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 434 aa

86 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
M05599_2.00 NN 70+% CisBP AAAGGTCAA 99.0% identity Open · Scan
MA1535.1 NN 70+% JASPAR CGAGGTCAC 99.0% identity Open · Scan
M00812_2.00 NN 70+% CisBP AGAGGTCACG 83.4% identity Open · Scan
M09275_2.00 NN 70+% CisBP GGGTCACTTCAGGTCAG 75.0% identity Open · Scan
Nearest Neighbor (70% - 40%)82
MotifPredictionSourceDNA bindingSupportLogoActions
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 67.8% identity Open · Scan
MA0677.1 NN 70-40% JASPAR GAGGTCAAAGGTCA 66.6% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 66.6% identity Open · Scan
MA1111.1 NN 70-40% JASPAR CAAAGGTCAAA 63.8% identity Open · Scan
M03421_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 63.1% identity Open · Scan
M11192_2.00 NN 70-40% CisBP GGGGTCACG 63.1% identity Open · Scan
MA0065.1 NN 70-40% JASPAR CCAGGGGTCAAAGGTCATCG 63.1% identity Open · Scan
MA0065.2 NN 70-40% JASPAR GTAGGGCAAAGGTCA 63.1% identity Open · Scan
M03392_2.00 NN 70-40% CisBP AAGGTCAACTAAAGGTCA 62.7% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 62.0% identity Open · Scan
M03432_2.00 NN 70-40% CisBP AAAGGTCAAGAGAGGTCA 61.8% identity Open · Scan
MA0159.1 NN 70-40% JASPAR AGGTCACGGAGAGGTCA 61.8% identity Open · Scan
M03435_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 61.6% identity Open · Scan
MA0855.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 61.6% identity Open · Scan
M09277_2.00 NN 70-40% CisBP GGGGGATCAAGAGGTCAAGG 61.5% identity Open · Scan
MA0859.1 NN 70-40% JASPAR AAGGTCAAAAGGTCAA 61.5% identity Open · Scan
MA1553.1 NN 70-40% JASPAR AAGGTCATGACCTT 61.5% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 60.5% identity Open · Scan
MA0071.1 NN 70-40% JASPAR ATCAAGGTCA 60.5% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 60.5% identity Open · Scan
M03424_2.00 NN 70-40% CisBP AAAGGTCACCAGAGGTCA 60.2% identity Open · Scan
M05563_2.00 NN 70-40% CisBP AAAAGGTCAA 60.2% identity Open · Scan
MA0857.1 NN 70-40% JASPAR AAAGGTCAAAAGGTCA 60.2% identity Open · Scan
MA1552.1 NN 70-40% JASPAR AAGGTCATGACCTT 60.2% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 59.7% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 59.1% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 59.1% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 59.1% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 59.1% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 58.9% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 58.8% identity Open · Scan
MA1110.1 NN 70-40% JASPAR TCAATGACCTA 58.8% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 58.6% identity Open · Scan
M00822_2.00 NN 70-40% CisBP GAGGTCAC 57.8% identity Open · Scan
M05661_2.00 NN 70-40% CisBP GGGGTCAAAGGTCAG 57.8% identity Open · Scan
MA0017.1 NN 70-40% JASPAR TGACCTTTGAACCT 57.8% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 57.7% identity Open · Scan
M02405_2.00 NN 70-40% CisBP AGAGGTCAGT 57.7% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 57.7% identity Open · Scan
M00371_2.00 NN 70-40% CisBP ACTTAATATATAC 57.1% identity Open · Scan
M02409_2.00 NN 70-40% CisBP GAGATCAA 56.9% identity Open · Scan
MA0164.1 NN 70-40% JASPAR CAAGCTT 56.4% identity Open · Scan
M06432_2.00 NN 70-40% CisBP AAAAATCAAAGGT 55.6% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 55.2% identity Open · Scan
M02393_2.00 NN 70-40% CisBP AGAGGTCAC 55.1% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 54.7% identity Open · Scan
MA0484.1 NN 70-40% JASPAR AGAGTCCAAAGTCCA 54.7% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 54.7% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 54.7% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 54.5% identity Open · Scan
M05584_2.00 NN 70-40% CisBP AGAGGTCACGACCTCT 54.5% identity Open · Scan
MA1550.1 NN 70-40% JASPAR AGGGGTCAAAGGTCAA 54.5% identity Open · Scan
M00811_2.00 NN 70-40% CisBP AAAGGTCAAG 54.2% identity Open · Scan
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 54.1% identity Open · Scan
M03426_2.00 NN 70-40% CisBP GGGGTCAAAGTCCAAT 53.6% identity Open · Scan
MA1541.1 NN 70-40% JASPAR GTCAAGTTCAAGGTCAA 53.5% identity Open · Scan
MA0856.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 53.3% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 53.2% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 53.2% identity Open · Scan
M09309_2.00 NN 70-40% CisBP AGGTCAGGGTGACCT 53.0% identity Open · Scan
MA0112.1 NN 70-40% JASPAR CCAGGTCACCGTGACCCC 53.0% identity Open · Scan
M03382_2.00 NN 70-40% CisBP GGGAACACAATGTTCCC 52.1% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 51.9% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 51.9% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 51.9% identity Open · Scan
M02408_2.00 NN 70-40% CisBP TGAGGTCAATTT 51.8% identity Open · Scan
M02389_2.00 NN 70-40% CisBP CAGGTCACT 51.4% identity Open · Scan
M03930_2.00 NN 70-40% CisBP AACTAGAGCAC 51.4% identity Open · Scan
M11139_2.00 NN 70-40% CisBP AAGTAGGTCACCGTGACCTACTT 51.0% identity Open · Scan
M05886_2.00 NN 70-40% CisBP AGTACATTTTGTTCT 50.7% identity Open · Scan
M07987_2.00 NN 70-40% CisBP GCCCAGAACATTCTGTTCCCT 50.7% identity Open · Scan
MA0113.1 NN 70-40% JASPAR GGGAACATTATGTCCTAA 50.7% identity Open · Scan
M00690_2.00 NN 70-40% CisBP AAAGATCAAA 50.6% identity Open · Scan
M09296_2.00 NN 70-40% CisBP TCAAGGTCA 50.0% identity Open · Scan
MA0007.1 NN 70-40% JASPAR ATAAGAACACCCTGTACCCGCC 50.0% identity Open · Scan
MA0007.2 NN 70-40% JASPAR AAGAACAGAATGTTC 50.0% identity Open · Scan
MA0007.3 NN 70-40% JASPAR GGGAACACGGTGTACCC 50.0% identity Open · Scan
MA0141.3 NN 70-40% JASPAR TCAAGGTCATA 50.0% identity Open · Scan
MA0258.1 NN 70-40% JASPAR CAAGGTCACGGTGACCTG 50.0% identity Open · Scan
MA0592.1 NN 70-40% JASPAR CCAAGGTCACA 50.0% identity Open · Scan
MA0592.2 NN 70-40% JASPAR TTCAAGGTCAT 50.0% identity Open · Scan
MA0643.1 NN 70-40% JASPAR TCAAGGTCAT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 434 aa
112-184

Region 112-184 0 PWM

Residues
73 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1R0N
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 112-1841 model
Actions
Predicted = Low DIMER_A0A087WUK4:112:184_1r0n_A_1 1r0n 112-184 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
112-180PF00105Double treble clef zinc finger, C4 typeoverlaps 112-184