ModCRE DB

Transcription factor

A0A087WVZ7 - ZNF229

Zinc finger protein 229

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 819 aa

135 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)124
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 62.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 61.4% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 61.2% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 60.5% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 59.6% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 59.6% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 59.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.6% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 58.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.2% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 56.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.8% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.8% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 56.8% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 56.7% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 56.3% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 56.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.3% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 56.0% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 56.0% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 55.9% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 55.9% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.8% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 55.7% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 55.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 55.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 55.4% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 55.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.2% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 55.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 55.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.9% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.7% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.5% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 54.3% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.3% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 54.3% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 54.2% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 54.1% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.8% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 53.8% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 53.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.6% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 53.6% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 53.6% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 53.6% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.5% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.5% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 53.5% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 53.3% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 53.2% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 53.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 53.1% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 53.1% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.9% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 52.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.7% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 52.7% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 52.5% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 52.5% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.4% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 52.4% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.3% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 52.2% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 52.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.0% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 51.9% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 51.8% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 51.8% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 51.8% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 51.8% identity Open · Scan
M07634_2.00 NN 70-40% CisBP AAACGTCCACG 51.7% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.7% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 51.6% identity Open · Scan
M00769_2.00 NN 70-40% CisBP ACTCCCCC 51.5% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 51.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 51.5% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 51.5% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 51.4% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 51.2% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 51.2% identity Open · Scan
MA1155.1 NN 70-40% JASPAR TGCACACACTGAAAA 51.2% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 51.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.1% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 51.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.0% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 51.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.9% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 50.8% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.8% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 50.7% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 50.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 50.7% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 50.5% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 50.5% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.3% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 50.3% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 50.1% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 50.1% identity Open · Scan
M07703_2.00 NN 70-40% CisBP CCGACGG 50.1% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 50.1% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 50.1% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 50.1% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 50.0% identity Open · Scan
ModCRE11
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:453:504_1llm_D_1 ModCRE Homology model ATTTCGCGGCAA Region 453-504 · 1 3D model Open · Scan
TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:480:757_5wjq_D_1 ModCRE Homology model GGGAAAGGGGGGGGACCGGGGCCGTCAA Region 480-757 · 1 3D model Open · Scan
TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:511:785_5v3j_E_1 ModCRE Homology model TACCCCGCTAGGAGGAACTGGGGGGA Region 511-785 · 1 3D model Open · Scan
TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:511:785_5v3m_C_1 ModCRE Homology model GGGGGGGGGGGGGCCGGGGGGCCCCC Region 511-785 · 1 3D model Open · Scan
TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:631:784_2i13_A_1 ModCRE Homology model ACTAAGAGACTCCTCCTTAAC Region 631-784 · 1 3D model Open · Scan
a0a087wvz7.af3.0 ModCRE AlphaFold3 model CTACAGGCTAGAGTACCACAGACTAGACTT AlphaFold3 model · ModCRE PWM Open · Scan
a0a087wvz7.af3.1 ModCRE AlphaFold3 model GGTGGGGGGGGGGGGGGGGGCGTGATGCAC AlphaFold3 model · ModCRE PWM Open · Scan
a0a087wvz7.af3.2 ModCRE AlphaFold3 model GGGGAGGGGGGGGGGGGGGCGGGGGAGCAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a087wvz7.af3.3 ModCRE AlphaFold3 model GGGGGGGGGGGGGGGGGGCGGGGGGGCCAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a087wvz7.af3.4 ModCRE AlphaFold3 model GTCTATACTATTTAACTAAGTGATTTAGCT AlphaFold3 model · ModCRE PWM Open · Scan
a0a087wvz7.af3.5 ModCRE AlphaFold3 model CTACAGGCTAGAGTACCACAGACTAGACTT AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 819 aa
371-785

Region 371-785 5 PWM

Residues
415 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 371-7856 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:453:504_1llm_D_1 1llm 453-504 View model · PDB
Predicted = Low TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:371:668_7w1m_H_1 7w1m 371-668 View model · PDB
Predicted = Low TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:480:757_5wjq_D_1 5wjq 480-757 View model · PDB
Predicted = Low TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:511:785_5v3j_E_1 5v3j 511-785 View model · PDB
Predicted = Low TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:511:785_5v3m_C_1 5v3m 511-785 View model · PDB
Predicted = Low TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:631:784_2i13_A_1 2i13 631-784 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 339:816 631 784 P:A · DNA:C,D 59.7% / 68.2% 100 View · PDB TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:631:784_2i13_A_1
1 5wjq 339:816 480 757 P:D · DNA:A,B 53.8% / 67.7% 98 View · PDB TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:480:757_5wjq_D_1
2 5v3m 339:816 511 785 P:C · DNA:A,B 53.6% / 69.6% 99 View · PDB TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:511:785_5v3m_C_1
3 5v3j 339:816 511 785 P:E · DNA:A,B 53.6% / 69.6% 99 View · PDB TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:511:785_5v3j_E_1
1 1llm 339:816 453,453 504,504 P:C,D · DNA:A,B 42.3% / 67.3% 59,61 View · PDB DIMER_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:453:504_1llm_D_1
5 7w1m 339:816 371 668 P:H · DNA:F,G 33.4% / 47.7% 92 View · PDB TFS_tr_A0A087WVZ7_A0A087WVZ7_HUMAN:371:668_7w1m_H_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a087wvz7.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087wvz7.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087wvz7.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087wvz7.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087wvz7.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087wvz7.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
33-74PF01352KRAB boxNo overlap with loaded model regions
343-365PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
371-393PF00096Zinc finger, C2H2 typeoverlaps 371-785
399-421PF00096Zinc finger, C2H2 typeoverlaps 371-785
427-449PF00096Zinc finger, C2H2 typeoverlaps 371-785
455-477PF00096Zinc finger, C2H2 typeoverlaps 371-785
483-505PF00096Zinc finger, C2H2 typeoverlaps 371-785
511-533PF00096Zinc finger, C2H2 typeoverlaps 371-785
542-560PF00096Zinc finger, C2H2 typeoverlaps 371-785
566-588PF00096Zinc finger, C2H2 typeoverlaps 371-785
594-616PF00096Zinc finger, C2H2 typeoverlaps 371-785
622-644PF00096Zinc finger, C2H2 typeoverlaps 371-785
678-700PF00096Zinc finger, C2H2 typeoverlaps 371-785
706-728PF00096Zinc finger, C2H2 typeoverlaps 371-785
734-756PF00096Zinc finger, C2H2 typeoverlaps 371-785
762-784PF00096Zinc finger, C2H2 typeoverlaps 371-785
790-812PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions