ModCRE DB

Transcription factor

A0A087WXT3 - ZNF33B

Zinc finger protein 33B

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 778 aa

107 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08263_2.00 NN 70+% CisBP ATCTCGGCACTTTGGGAGGCCA 92.6% identity Open · Scan
Nearest Neighbor (70% - 40%)106
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 64.7% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 64.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.6% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.6% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 62.3% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 61.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 61.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 60.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 60.3% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 60.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 60.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 59.9% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.2% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 58.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.0% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 57.8% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 57.8% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 57.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 57.4% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.3% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 57.2% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 57.2% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 57.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.9% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.8% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.4% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 56.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.3% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.3% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 56.2% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 56.2% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.2% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 56.0% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 55.9% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 55.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.7% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 55.7% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 55.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.4% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 55.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.4% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 55.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 55.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 54.9% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 54.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.8% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.6% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 54.5% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 54.4% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.9% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 53.9% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 53.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.9% identity Open · Scan
M05855_2.00 NN 70-40% CisBP GTATTATACCCAGCT 53.8% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 53.7% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.6% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 53.5% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 53.5% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 53.2% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 53.1% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 52.8% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.6% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 52.5% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 52.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 52.3% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 52.3% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 52.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.2% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 52.2% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 52.1% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 52.0% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 51.9% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.9% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 51.7% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 51.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.7% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 51.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.4% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 51.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.1% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 50.9% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.9% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.7% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 50.7% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 50.7% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.4% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 50.4% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 50.3% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 50.2% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 50.2% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 50.1% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.1% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 778 aa
326-604

Region 326-604 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 326-6041 model
Actions
Predicted = Low TFS_A0A087WXT3:326:604_5wjq_D_1 5wjq 326-604 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
11-52PF01352KRAB boxNo overlap with loaded model regions
329-351PF00096Zinc finger, C2H2 typeoverlaps 326-604
357-379PF00096Zinc finger, C2H2 typeoverlaps 326-604
385-407PF00096Zinc finger, C2H2 typeoverlaps 326-604
413-435PF00096Zinc finger, C2H2 typeoverlaps 326-604
441-463PF00096Zinc finger, C2H2 typeoverlaps 326-604
469-491PF00096Zinc finger, C2H2 typeoverlaps 326-604
497-519PF00096Zinc finger, C2H2 typeoverlaps 326-604
525-547PF00096Zinc finger, C2H2 typeoverlaps 326-604
553-575PF00096Zinc finger, C2H2 typeoverlaps 326-604
581-603PF00096Zinc finger, C2H2 typeoverlaps 326-604
609-631PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
637-659PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
665-687PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
693-715PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
722-743PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
749-771PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions