ModCRE DB

Transcription factor

A0A087X2F1 - ZSCAN26

Zinc finger and SCAN domain containing 26

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 344 aa

61 Generated PWM 24 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)50
MotifPredictionSourceDNA bindingSupportLogoActions
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 61.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.4% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 60.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.2% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 59.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 59.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 59.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 57.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 57.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 57.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 57.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 57.1% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 56.1% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 55.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 54.3% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 54.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 53.4% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 53.4% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.1% identity Open · Scan
MA0748.1 NN 70-40% JASPAR GTCCGCCATTA 53.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.9% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 52.9% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 52.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 52.6% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 52.4% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 52.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 51.8% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 51.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 51.8% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.5% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 51.4% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 51.4% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 51.3% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 51.2% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 51.2% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 51.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 51.2% identity Open · Scan
MA0095.1 NN 70-40% JASPAR GCCATC 51.1% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.9% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 50.9% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.9% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.6% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 50.6% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 50.1% identity Open · Scan
ModCRE11
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:145:255_5ei9_E_1 ModCRE Homology model CCCCGGGGCCGGGGGCC Region 145-255 · 1 3D model Open · Scan
TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:157:310_2i13_A_1 ModCRE Homology model CTAACTTAGGTAACTGTATTT Region 157-310 · 1 3D model Open · Scan
TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:66:338_5wjq_D_1 ModCRE Homology model GGGGGGGGGGGCGGGGGGGGGGGGCAAG Region 66-338 · 1 3D model Open · Scan
TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:70:338_5v3j_E_1 ModCRE Homology model ATCCCCCCCAGGGGCCCGGGGGGGGG Region 70-338 · 1 3D model Open · Scan
TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:70:338_5v3m_C_1 ModCRE Homology model TTGCCCGGGGGTGGGGGTGGGGCCCC Region 70-338 · 1 3D model Open · Scan
a0a087x2f1.af3.0 ModCRE AlphaFold3 model TACTTACTATTGGTATTCTGCTAGTAAAG AlphaFold3 model · ModCRE PWM Open · Scan
a0a087x2f1.af3.1 ModCRE AlphaFold3 model CGTTTCTATAAGAAGTTCAAGTGAAAGAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a087x2f1.af3.2 ModCRE AlphaFold3 model TTCTTACTCCCCTAACTCTTAGAGAAACG AlphaFold3 model · ModCRE PWM Open · Scan
a0a087x2f1.af3.3 ModCRE AlphaFold3 model TACTTACTATTGGTATTCTGCTAGTAAAG AlphaFold3 model · ModCRE PWM Open · Scan
a0a087x2f1.af3.4 ModCRE AlphaFold3 model ATCCAGGGGGGGGGCGTGGGGGGCCGCG AlphaFold3 model · ModCRE PWM Open · Scan
a0a087x2f1.af3.5 ModCRE AlphaFold3 model CGCGCCCCCCCCCGCCCCCCTCCTGGATC AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 344 aa
66-338

Region 66-338 5 PWM

Residues
273 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
24 active PDB models 6 summary rows
Region 66-3386 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0A087X2F1_A0A087X2F1_HUMAN:174:225_1llm_D_1 1llm 174-225 View model · PDB
Predicted = Low TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:145:255_5ei9_E_1 5ei9 145-255 View model · PDB
Predicted = Low TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:157:310_2i13_A_1 2i13 157-310 View model · PDB
Predicted = Low TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:66:338_5wjq_D_1 5wjq 66-338 View model · PDB
Predicted = Low TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:70:338_5v3j_E_1 5v3j 70-338 View model · PDB
Predicted = Low TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:70:338_5v3m_C_1 5v3m 70-338 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 66:344 145 255 P:E · DNA:A,B 53.2% / 65.8% 100 View · PDB TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:145:255_5ei9_E_1
4 2i13 66:344 157 310 P:A · DNA:C,D 51.3% / 61.7% 100 View · PDB TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:157:310_2i13_A_1
1 1llm 66:344 174,174 225,225 P:C,D · DNA:A,B 48.1% / 63.5% 59,61 View · PDB DIMER_tr_A0A087X2F1_A0A087X2F1_HUMAN:174:225_1llm_D_1
2 5v3m 66:344 70 338 P:C · DNA:A,B 42.3% / 57.3% 97 View · PDB TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:70:338_5v3m_C_1
3 5v3j 66:344 70 338 P:E · DNA:A,B 42.3% / 57.3% 97 View · PDB TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:70:338_5v3j_E_1
1 5wjq 66:344 66 338 P:D · DNA:A,B 40.6% / 57.2% 97 View · PDB TFS_tr_A0A087X2F1_A0A087X2F1_HUMAN:66:338_5wjq_D_1
Full sequence / unlocalized models18 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a087x2f1.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_dimer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_dimer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_dimer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_dimer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_dimer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_dimer.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_monomer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_monomer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_monomer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_monomer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_monomer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a087x2f1_monomer.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
148-170PF00096Zinc finger, C2H2 typeoverlaps 66-338
176-198PF00096Zinc finger, C2H2 typeoverlaps 66-338
206-226PF00096Zinc finger, C2H2 typeoverlaps 66-338
233-254PF00096Zinc finger, C2H2 typeoverlaps 66-338
260-282PF00096Zinc finger, C2H2 typeoverlaps 66-338
288-310PF00096Zinc finger, C2H2 typeoverlaps 66-338
316-338PF00096Zinc finger, C2H2 typeoverlaps 66-338