ModCRE DB

Transcription factor

A0A089VKS7 - Egr-1

Early growth response protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 543 aa

49 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0162.2 NN 70+% JASPAR CCCCCGCCCCCGCC 99.8% identity Open · Scan
MA0162.1 NN 70+% JASPAR TGCGTGGGCGG 91.1% identity Open · Scan
M06072_2.00 NN 70+% CisBP CCACGCCCACGCAC 87.0% identity Open · Scan
MA0733.1 NN 70+% JASPAR TTACGCCCACGCATTT 78.8% identity Open · Scan
Nearest Neighbor (70% - 40%)45
MotifPredictionSourceDNA bindingSupportLogoActions
M08968_2.00 NN 70-40% CisBP CCCCCCCTCCTCCCCCGCCC 67.1% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 66.0% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 64.2% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 64.2% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 62.5% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 62.5% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 62.5% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 62.5% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 62.5% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 62.5% identity Open · Scan
M00249_2.00 NN 70-40% CisBP ACTCCCCCGCA 61.5% identity Open · Scan
MA1627.1 NN 70-40% JASPAR CCCCTCCCCCACAC 61.5% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 60.7% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 60.7% identity Open · Scan
M01537_2.00 NN 70-40% CisBP TACCCCGCAC 59.0% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 58.9% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 58.9% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 58.9% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 58.9% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 57.8% identity Open · Scan
MA1107.1 NN 70-40% JASPAR GGCCACACCCACC 57.8% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 57.1% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 56.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.7% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 56.0% identity Open · Scan
M02903_2.00 NN 70-40% CisBP ATGCCACGCCCCTTTTTG 55.5% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 54.0% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 53.2% identity Open · Scan
M01180_2.00 NN 70-40% CisBP ACCCCTGG 53.1% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 52.7% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 52.4% identity Open · Scan
M00031_2.00 NN 70-40% CisBP TACCCCGCAC 52.2% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 52.2% identity Open · Scan
M01439_2.00 NN 70-40% CisBP TTACGCCACA 52.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 51.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 51.1% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.1% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 51.1% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.6% identity Open · Scan
M00036_2.00 NN 70-40% CisBP TACCCCTT 50.0% identity Open · Scan
M00608_2.00 NN 70-40% CisBP CCTGTTG 50.0% identity Open · Scan
M01432_2.00 NN 70-40% CisBP GACGCCAC 50.0% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 50.0% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 50.0% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 543 aa
335-420

Region 335-420 0 PWM

Residues
86 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
4R2A
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 335-4201 model
Actions
Predicted = Low TFS_A0A089VKS7:335:420_4r2a_A_1 4r2a 335-420 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
135-237PF11928Early growth response N-terminal domainNo overlap with loaded model regions
338-362PF00096Zinc finger, C2H2 typeoverlaps 335-420
368-390PF00096Zinc finger, C2H2 typeoverlaps 335-420
396-418PF00096Zinc finger, C2H2 typeoverlaps 335-420
452-530PF11914Domain of unknown function (DUF3432)No overlap with loaded model regions