ModCRE DB

Transcription factor

A0A0A0MR11 - ZNF33A

Zinc finger protein 248

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 829 aa

110 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08263_2.00 NN 70+% CisBP ATCTCGGCACTTTGGGAGGCCA 99.8% identity Open · Scan
Nearest Neighbor (70% - 40%)109
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 67.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.6% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 62.3% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 61.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.2% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 60.5% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 60.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 60.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 60.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 59.6% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 59.6% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 59.6% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 59.1% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 58.3% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 57.5% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 57.4% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.2% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 57.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.9% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.8% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.8% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 56.8% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 56.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 56.5% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 56.5% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 56.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 56.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.4% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 56.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.1% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 56.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 55.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 55.4% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 55.3% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 55.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.2% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 55.1% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 54.9% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 54.9% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 54.9% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 54.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 54.9% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 54.9% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 54.9% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 54.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.1% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 54.0% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 53.9% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 53.7% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.7% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.6% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 53.6% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 53.5% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 53.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 53.1% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 53.0% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 52.9% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 52.9% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 52.9% identity Open · Scan
M04651_2.00 NN 70-40% CisBP TTCACTATTATAGTGAA 52.8% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 52.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 52.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.7% identity Open · Scan
M05855_2.00 NN 70-40% CisBP GTATTATACCCAGCT 52.5% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 52.2% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.2% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 52.2% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.0% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 52.0% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 51.8% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 51.7% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 51.7% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 51.5% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 51.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.1% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 51.1% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 51.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.9% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 50.7% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.6% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.4% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.4% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.4% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 50.3% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 50.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 50.2% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 50.2% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.1% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 829 aa
348-507

Region 348-507 0 PWM

Residues
160 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 348-5071 model
Actions
Predicted = Low TFS_A0A0A0MR11:348:507_5t0u_A_1 5t0u 348-507 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
29-70PF01352KRAB boxNo overlap with loaded model regions
347-369PF00096Zinc finger, C2H2 typeoverlaps 348-507
375-397PF00096Zinc finger, C2H2 typeoverlaps 348-507
403-425PF00096Zinc finger, C2H2 typeoverlaps 348-507
431-453PF00096Zinc finger, C2H2 typeoverlaps 348-507
459-481PF00096Zinc finger, C2H2 typeoverlaps 348-507
487-509PF00096Zinc finger, C2H2 typeoverlaps 348-507
515-537PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
543-565PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
571-593PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
599-621PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
627-649PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
655-677PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
683-705PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
711-733PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
740-761PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
767-789PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions