ModCRE DB

Transcription factor

A0A0A0MT46 - POU2F1

POU domain protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 594 aa

29 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)9
MotifPredictionSourceDNA bindingSupportLogoActions
MA0785.1 NN 70+% JASPAR AATATGCAAATT 90.9% identity Open · Scan
M10829_2.00 NN 70+% CisBP ATATAATTATGCAAATTAAAAGA 89.4% identity Open · Scan
M00548_2.00 NN 70+% CisBP GATAATTAA 84.0% identity Open · Scan
M02245_2.00 NN 70+% CisBP ATGCTAATTA 80.0% identity Open · Scan
MA0627.2 NN 70+% JASPAR AATATGCAAATAA 78.6% identity Open · Scan
M00549_2.00 NN 70+% CisBP GATAATGAG 78.1% identity Open · Scan
MA0627.1 NN 70+% JASPAR TTGTATGCAAATTAGA 77.3% identity Open · Scan
M06556_2.00 NN 70+% CisBP TATGCAAATTAG 75.0% identity Open · Scan
M02242_2.00 NN 70+% CisBP GTATAATTAG 71.7% identity Open · Scan
Nearest Neighbor (70% - 40%)20
MotifPredictionSourceDNA bindingSupportLogoActions
M02243_2.00 NN 70-40% CisBP ATAATGCATA 67.4% identity Open · Scan
M00553_2.00 NN 70-40% CisBP ATGCATAA 63.2% identity Open · Scan
M02236_2.00 NN 70-40% CisBP CTAATTAAC 63.2% identity Open · Scan
MA0788.1 NN 70-40% JASPAR ATTATGCTAATTT 63.2% identity Open · Scan
MA0787.1 NN 70-40% JASPAR TTATGCAAATTA 63.1% identity Open · Scan
M02240_2.00 NN 70-40% CisBP ATAATGAA 62.2% identity Open · Scan
M02235_2.00 NN 70-40% CisBP CTAATTAA 61.7% identity Open · Scan
M05500_2.00 NN 70-40% CisBP TTATGCAAATGAG 61.7% identity Open · Scan
M09227_2.00 NN 70-40% CisBP CTCATGAATATTCAAG 61.4% identity Open · Scan
MA0786.1 NN 70-40% JASPAR TTATGCAAATTA 61.4% identity Open · Scan
MA0789.1 NN 70-40% JASPAR TATGCAAAT 61.0% identity Open · Scan
M07542_2.00 NN 70-40% CisBP TGCATA 60.7% identity Open · Scan
MA0507.1 NN 70-40% JASPAR TTCATTTGCATAT 58.0% identity Open · Scan
MA0142.1 NN 70-40% JASPAR CTTTGTTATGCAAAT 53.1% identity Open · Scan
MA1115.1 NN 70-40% JASPAR ATATGCAAATT 53.1% identity Open · Scan
MA0792.1 NN 70-40% JASPAR TATGCAAAT 52.4% identity Open · Scan
M02239_2.00 NN 70-40% CisBP TATGCAAATT 52.1% identity Open · Scan
M00802_2.00 NN 70-40% CisBP ATTATTAATA 50.3% identity Open · Scan
M05454_2.00 NN 70-40% CisBP ATGCATAAATTAA 50.3% identity Open · Scan
MA0784.1 NN 70-40% JASPAR AATATGCAAATTAG 50.3% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 594 aa
249-390

Region 249-390 0 PWM

Residues
142 aa
Domains
PF00157 · Pou domain - N-terminal to homeobox domain PF00046 · Homeodomain
3D models
1 active PDB
Templates
3L1P
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 249-3901 model
Actions
Predicted = Low DIMER_A0A0A0MT46:249:390_3l1p_B_1 3l1p 249-390 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
259-308PF00157Pou domain - N-terminal to homeobox domainoverlaps 249-390
334-390PF00046Homeodomainoverlaps 249-390
401-594PF19536POU domain, class 2, transcription factor 1 C-terminalNo overlap with loaded model regions