Region 130-166 0 PWM
- Residues
- 37 aa
- Domains
- PF00505 · HMG (high mobility group) box
- 3D models
- 1 active PDB
- Templates
- 4EUW
- Sources
- Structure model
Transcription factor
A0A0A6YYK5
Uncharacterized protein
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 440 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M03516_2.00 | Known | CisBP | AACAATGTTCATTGTT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
440 aa
130-166
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 130-1661 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_A0A0A6YYK5:130:166_4euw_A_1 | 4euw | 130-166 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 27-69 | PF01585 | G-patch domain | No overlap with loaded model regions |
| 130-165 | PF00505 | HMG (high mobility group) box | overlaps 130-166 |
| 244-283 | PF12067 | Sox 17/18 central domain | No overlap with loaded model regions |