ModCRE DB

Transcription factor

A0A0B4J2G0 - ZNF107

Zinc finger protein 107

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 852 aa

73 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 77.6% identity Open · Scan
M08295_2.00 NN 70+% CisBP CTGCTGGAATCTCCA 75.1% identity Open · Scan
M08381_2.00 NN 70+% CisBP ACATTTTGTCCTCCTAGTCCT 71.7% identity Open · Scan
Nearest Neighbor (70% - 40%)70
MotifPredictionSourceDNA bindingSupportLogoActions
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 68.6% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 66.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.4% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 65.4% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 65.0% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 63.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.5% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 63.4% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 63.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 63.0% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 62.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.7% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 60.6% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 60.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 59.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.6% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 59.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 59.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.9% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.4% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 56.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 56.6% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 56.5% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 56.5% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 56.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 56.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.0% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 55.5% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.2% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 53.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.8% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 52.7% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 52.3% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.0% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 51.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 51.9% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.8% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 51.6% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.3% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 51.2% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 51.0% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.9% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 50.6% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.2% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.1% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 50.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 50.0% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 852 aa
282-560

Region 282-560 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 282-5601 model
Actions
Predicted = Low TFS_A0A0B4J2G0:282:560_5wjq_D_1 5wjq 282-560 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
173-195PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
201-223PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
229-251PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
258-279PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
313-335PF00096Zinc finger, C2H2 typeoverlaps 282-560
397-419PF00096Zinc finger, C2H2 typeoverlaps 282-560
425-447PF00096Zinc finger, C2H2 typeoverlaps 282-560
453-473PF00096Zinc finger, C2H2 typeoverlaps 282-560
481-503PF00096Zinc finger, C2H2 typeoverlaps 282-560
509-531PF00096Zinc finger, C2H2 typeoverlaps 282-560
537-559PF00096Zinc finger, C2H2 typeoverlaps 282-560
565-587PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
677-699PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
705-727PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
733-755PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
761-783PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
789-811PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions