Transcription factor

A0A0B5IYB7 - FOXE3

UniProtKB entry deleted

38 Generated PWM 33 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)21

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M09104_2.00	NN 70-40%	CisBP	CCTTGTTTACTTT	63.4% identity		Open · Scan
M10570_2.00	NN 70-40%	CisBP	CTTAAGTAAACAATGG	63.3% identity		Open · Scan
MA0847.1	NN 70-40%	JASPAR	GTAAACA	63.1% identity		Open · Scan
MA0031.1	NN 70-40%	JASPAR	GTAAACAT	62.7% identity		Open · Scan
M10565_2.00	NN 70-40%	CisBP	AAACAAACAATC	61.6% identity		Open · Scan
MA0041.1	NN 70-40%	JASPAR	GAATGTTTGTTT	61.6% identity		Open · Scan
M03741_2.00	NN 70-40%	CisBP	TTATGTAAACAAT	61.0% identity		Open · Scan
M01982_2.00	NN 70-40%	CisBP	TATGTAAACA	56.5% identity		Open · Scan
MA0032.1	NN 70-40%	JASPAR	GGTAAGTA	56.5% identity		Open · Scan
MA0033.1	NN 70-40%	JASPAR	TATACATA	55.2% identity		Open · Scan
M00164_2.00	NN 70-40%	CisBP	AATGTAAACA	55.0% identity		Open · Scan
M03743_2.00	NN 70-40%	CisBP	TATGTAAATATTTACATA	54.0% identity		Open · Scan
M10571_2.00	NN 70-40%	CisBP	AAAAATAAATATAAGG	53.9% identity		Open · Scan
MA0846.1	NN 70-40%	JASPAR	TAAGTAAACAAA	53.9% identity		Open · Scan
M03034_2.00	NN 70-40%	CisBP	GTAAACA	53.8% identity		Open · Scan
MA1487.1	NN 70-40%	JASPAR	CCTTAAATAAACAAT	53.4% identity		Open · Scan
MA0042.1	NN 70-40%	JASPAR	GGATGTTTGTTT	52.0% identity		Open · Scan
M01983_2.00	NN 70-40%	CisBP	TGTTTACATA	51.0% identity		Open · Scan
M03735_2.00	NN 70-40%	CisBP	AAACAATAATATT	51.0% identity		Open · Scan
MA0845.1	NN 70-40%	JASPAR	TATGTAAATAT	51.0% identity		Open · Scan
MA0148.1	NN 70-40%	JASPAR	TGTTTACTTTG	50.0% identity		Open · Scan

ModCRE17

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_2a07_F_1	ModCRE	Homology model	AAGTTAAAAAAATTTT	Region 5-71 · 1 3D model		Open · Scan
DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_2a07_K_1	ModCRE	Homology model	CTTTAAATAAAAAAAATAA	Region 5-71 · 1 3D model		Open · Scan
DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_3qrf_G_1	ModCRE	Homology model	TATAATTTTTTAATAG	Region 5-71 · 1 3D model		Open · Scan
DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_4wk8_G_1	ModCRE	Homology model	GGTAAAATTTATAAAAGG	Region 5-71 · 1 3D model		Open · Scan
DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:83_6ncm_A_1	ModCRE	Homology model	ATTTAAATTTTTT	Region 5-83 · 1 3D model		Open · Scan
TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:100_2hdc_A_1	ModCRE	Homology model	AGTTGGTTGATTTCAAA	Region 5-100 · 1 3D model		Open · Scan
TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:101_6akp_C_1	ModCRE	Homology model	TGAAATATTTTTTT	Region 5-101 · 1 3D model		Open · Scan
TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:101_6lbm_C_1	ModCRE	Homology model	TTTTTTTTTTATAA	Region 5-101 · 1 3D model		Open · Scan
TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:104_1vtn_C_1	ModCRE	Homology model	TTTTAAGTAAACA	Region 5-104 · 1 3D model		Open · Scan
TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:83_5x07_F_1	ModCRE	Homology model	TCTTTTTTCATTTAAA	Region 5-83 · 1 3D model		Open · Scan
TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:99_6ako_C_1	ModCRE	Homology model	ATTTGTTTAATTATTT	Region 5-99 · 1 3D model		Open · Scan
a0a0b5iyb7.af3.0	ModCRE	AlphaFold3 model	AAAAAAAATTAAAATATTTAAATTTTTAAA	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0b5iyb7.af3.1	ModCRE	AlphaFold3 model	TTTAAAAATTTAAAAATTTGATTTTTAAAA	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0b5iyb7.af3.2	ModCRE	AlphaFold3 model	TAAAAATTTTAAAATATTTTAAAATTTTTA	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0b5iyb7.af3.3	ModCRE	AlphaFold3 model	AAAAAAATTAAAATATTTTATTTTTAAA	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0b5iyb7.af3.4	ModCRE	AlphaFold3 model	TAAAAAAAATAAAAATTTTTAATTTTTATA	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0b5iyb7.af3.5	ModCRE	AlphaFold3 model	AAAAAAAATTAAAATATTTAAATTTTTAAA	AlphaFold3 model · ModCRE PWM		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

Region 5-104 11 PWM

Residues

100 aa

Domains

No overlapping PFAM annotation recorded

3D models

15 active PDBs · 10 summary rows

Templates

1VTN, 2A07, 2C6Y, 2HDC, 3QRF, 4WK8, 5X07, 6AKO, ...

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

33 active PDB models 10 summary rows

Region 5-10415 models · 10 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:100_2c6y_A_1	2c6y	5-100	View model · PDB
Predicted = Low	DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_2a07_F_1	2a07	5-71	View model · PDB
Predicted = Low	DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_2a07_K_1	2a07	5-71	View model · PDB
Predicted = Low	DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_3qrf_G_1	3qrf	5-71	View model · PDB
Predicted = Low	DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_4wk8_G_1	4wk8	5-71	View model · PDB
Predicted = Low	DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:83_6ncm_A_1	6ncm	5-83	View model · PDB
Predicted = Low	DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:83_7vox_C_1	7vox	5-83	View model · PDB
Predicted = Low	DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:97_6o3t_A_1	6o3t	5-97	View model · PDB
Predicted = Low	TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:100_2hdc_A_1	2hdc	5-100	View model · PDB
Predicted = Low	TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:101_6akp_C_1	6akp	5-101	View model · PDB
Predicted = Low	TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:101_6lbm_C_1	6lbm	5-101	View model · PDB
Predicted = Low	TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:104_1vtn_C_1	1vtn	5-104	View model · PDB
Predicted = Low	TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:83_5x07_F_1	5x07	5-83	View model · PDB
Predicted = Low	TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:97_6o3t_A_1	6o3t	5-97	View model · PDB
Predicted = Low	TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:99_6ako_C_1	6ako	5-99	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	2hdc	1:104	5	100	P:A · DNA:B,C	60.4% / 70.8%	84	View · PDB TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:100_2hdc_A_1
1	6o3t	1:104	5,6	97,81	P:A,B · DNA:C,D	54.8% / 71.0%	83,78	View · PDB DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:97_6o3t_A_1
4	6o3t	1:104	5,6	97,81	P:A,B · DNA:C,D	54.8% / 71.0%	83,78	View · PDB TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:97_6o3t_A_1
2	6ako	1:104	5	99	P:C · DNA:A,B	54.7% / 71.6%	83	View · PDB TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:99_6ako_C_1
3	6akp	1:104	5	101	P:C · DNA:A,B	53.6% / 70.1%	82	View · PDB TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:101_6akp_C_1
5	6lbm	1:104	5	101	P:C · DNA:A,B	52.6% / 69.1%	84	View · PDB TFS_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:101_6lbm_C_1
2	7vox	1:104	5,5	83,83	P:A,C · DNA:D,E	48.1% / 62.0%	76,76	View · PDB DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:83_7vox_C_1
3	2c6y	1:104	5,5	100,97	P:A,B · DNA:C,D	38.5% / 54.2%	83,83	View · PDB DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:100_2c6y_A_1
4	4wk8	1:104	5,5	71,71	P:F,G · DNA:A,B	35.8% / 50.7%	66,66	View · PDB DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:71_4wk8_G_1
5	6ncm	1:104	5,5	83,83	P:A,B · DNA:C,D	33.8% / 50.0%	64,65	View · PDB DIMER_tr_A0A0B5IYB7_A0A0B5IYB7_HUMAN:5:83_6ncm_A_1

Full sequence / unlocalized models18 models

Source	Model	Template	Residues modeled	Actions
Predicted = Low	a0a0b5iyb7.af3.0	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7.af3.1	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7.af3.2	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7.af3.3	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7.af3.4	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7.af3.5	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_dimer.af3.0	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_dimer.af3.1	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_dimer.af3.2	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_dimer.af3.3	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_dimer.af3.4	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_dimer.af3.5	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_monomer.af3.0	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_monomer.af3.1	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_monomer.af3.2	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_monomer.af3.3	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_monomer.af3.4	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0b5iyb7_monomer.af3.5	-	Full sequence / not localized	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Imported domain tags1

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