Transcription factor

A0A0C4DFN0 - ZSCAN25

UniProtKB entry deleted

97 Generated PWM 14 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)86

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	67.0% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	67.0% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	65.9% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	65.8% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	64.7% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	64.7% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	63.6% identity		Open · Scan
M00769_2.00	NN 70-40%	CisBP	ACTCCCCC	63.3% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	62.6% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	61.4% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	60.5% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	59.2% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	58.9% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	58.1% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	57.5% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	57.5% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	57.0% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	56.9% identity		Open · Scan
M07777_2.00	NN 70-40%	CisBP	GCCAATTTCCGTGGTGTAAAT	56.9% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	56.7% identity		Open · Scan
M08917_2.00	NN 70-40%	CisBP	GCTGAGCCATGTGGGGTGCT	56.7% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	56.5% identity		Open · Scan
M08247_2.00	NN 70-40%	CisBP	AAAAATAACAAACGG	56.2% identity		Open · Scan
MA1594.1	NN 70-40%	JASPAR	AGGGGACATCACTACAGATCCCAC	56.2% identity		Open · Scan
M04475_2.00	NN 70-40%	CisBP	GATGCACGTACCGTGCCTCA	56.0% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	55.8% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	55.4% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	55.3% identity		Open · Scan
M07638_2.00	NN 70-40%	CisBP	TGCAGCTCCCTGCCC	54.9% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	54.9% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	54.5% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	54.4% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	53.9% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	53.5% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	53.5% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	53.4% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	53.4% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	53.4% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	53.3% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	53.1% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	53.1% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	52.8% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	52.8% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	52.7% identity		Open · Scan
M00149_2.00	NN 70-40%	CisBP	CGTACGCC	52.6% identity		Open · Scan
M07593_2.00	NN 70-40%	CisBP	AGATGAAGTCACCCCTCTTAC	52.6% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	52.6% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	52.5% identity		Open · Scan
M08358_2.00	NN 70-40%	CisBP	CCCTCCCCCTCC	52.4% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	52.3% identity		Open · Scan
M07678_2.00	NN 70-40%	CisBP	CCCGCCCCCTCCTCCCCCTTCCCACCC	52.3% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	52.2% identity		Open · Scan
M08386_2.00	NN 70-40%	CisBP	GCCTTAAAAGCTCAGCAC	52.2% identity		Open · Scan
M04430_2.00	NN 70-40%	CisBP	GACCACGCCCA	51.9% identity		Open · Scan
MA0742.1	NN 70-40%	JASPAR	GACCACGCCCTTATT	51.9% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	51.8% identity		Open · Scan
M08860_2.00	NN 70-40%	CisBP	TCTTATAAGGGCACTAATCCCATT	51.8% identity		Open · Scan
M07746_2.00	NN 70-40%	CisBP	CAGCTGGCGCCCAACATGGGTCCC	51.7% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	51.7% identity		Open · Scan
M07693_2.00	NN 70-40%	CisBP	CTCCTGTGTGTGCCTTGGCTG	51.5% identity		Open · Scan
M08357_2.00	NN 70-40%	CisBP	GAGCCTGCTACTGAGCCTGGG	51.5% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	51.3% identity		Open · Scan
M08291_2.00	NN 70-40%	CisBP	AATCCAGCCCTAGACTCTCCC	51.3% identity		Open · Scan
M01192_2.00	NN 70-40%	CisBP	CCCCCTGA	51.2% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	51.1% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	51.0% identity		Open · Scan
M01442_2.00	NN 70-40%	CisBP	ACCCCACATT	50.8% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	50.7% identity		Open · Scan
M07729_2.00	NN 70-40%	CisBP	CCAGACTGCCTGCCAAAACCCCCT	50.7% identity		Open · Scan
M07762_2.00	NN 70-40%	CisBP	GCCGCGCACAGGCTTCTAGCC	50.7% identity		Open · Scan
M08256_2.00	NN 70-40%	CisBP	GTGCCTT	50.7% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	50.7% identity		Open · Scan
M00779_2.00	NN 70-40%	CisBP	GCCACGCCCA	50.6% identity		Open · Scan
M08867_2.00	NN 70-40%	CisBP	CACCCCCTG	50.6% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	50.5% identity		Open · Scan
M07645_2.00	NN 70-40%	CisBP	CTCCTT	50.4% identity		Open · Scan
M07600_2.00	NN 70-40%	CisBP	GCATTAGC	50.2% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	50.2% identity		Open · Scan
M00019_2.00	NN 70-40%	CisBP	ACCCCTAATT	50.0% identity		Open · Scan
M01531_2.00	NN 70-40%	CisBP	CCCCCCCTAAAT	50.0% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	50.0% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	50.0% identity		Open · Scan
M08292_2.00	NN 70-40%	CisBP	TGTATTCCTTGTCATGTGTGG	50.0% identity		Open · Scan
M08525_2.00	NN 70-40%	CisBP	CCCCGCA	50.0% identity		Open · Scan
M08540_2.00	NN 70-40%	CisBP	CCCCT	50.0% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	50.0% identity		Open · Scan

ModCRE11

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5v3j_E_1	ModCRE	Homology model	CCTCCGGGCGACCCCCCTCCGGG	Region 267-462 · 1 3D model		Open · Scan
TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5v3m_C_1	ModCRE	Homology model	GGCCCCGGGCCCCCCCCCCGCCGG	Region 267-462 · 1 3D model		Open · Scan
TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5wjq_D_1	ModCRE	Homology model	CCCCCCCGCCCCCCCCCCGGGAGG	Region 267-462 · 1 3D model		Open · Scan
TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:305:456_2i13_A_1	ModCRE	Homology model	AGCCAATACCCTCTAGTTCGT	Region 305-456 · 1 3D model		Open · Scan
TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:321:430_5ei9_E_1	ModCRE	Homology model	CCCCCCCCCCCCGGCGG	Region 321-430 · 1 3D model		Open · Scan
a0a0c4dfn0.af3.0	ModCRE	AlphaFold3 model	CCGCGGGGGGGGGGGGGCGGGGGGGGGG	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0c4dfn0.af3.1	ModCRE	AlphaFold3 model	CCGGGGGGGGGGGGGGCGGGGGGGGGG	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0c4dfn0.af3.2	ModCRE	AlphaFold3 model	CCTCGGGGGGGGGGGGGCGGGGGGGGGG	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0c4dfn0.af3.3	ModCRE	AlphaFold3 model	CTGCCGGGGGGGGGGGGGGGGGGGGGC	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0c4dfn0.af3.4	ModCRE	AlphaFold3 model	CGGGGGGGGGGGGGGGGGGGGGGGGGG	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0c4dfn0.af3.5	ModCRE	AlphaFold3 model	CGGGGGGGGGGGGGGGCCGCGGGGGGG	AlphaFold3 model · ModCRE PWM		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

Region 267-462 5 PWM

Residues

196 aa

Domains

No overlapping PFAM annotation recorded

3D models

8 active PDBs · 8 summary rows

Templates

1LLM, 2I13, 2WTY, 4AUW, 5EI9, 5V3J, 5V3M, 5WJQ

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

14 active PDB models 8 summary rows

Region 267-4628 models · 8 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:303:340_2wty_A_1	2wty	303-340	View model · PDB
Predicted = Low	DIMER_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:303:340_4auw_B_1	4auw	303-340	View model · PDB
Predicted = Low	DIMER_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:405:458_1llm_C_1	1llm	405-458	View model · PDB
Predicted = Low	TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5v3j_E_1	5v3j	267-462	View model · PDB
Predicted = Low	TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5v3m_C_1	5v3m	267-462	View model · PDB
Predicted = Low	TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5wjq_D_1	5wjq	267-462	View model · PDB
Predicted = Low	TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:305:456_2i13_A_1	2i13	305-456	View model · PDB
Predicted = Low	TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:321:430_5ei9_E_1	5ei9	321-430	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	2i13	259:462	305	456	P:A · DNA:C,D	60.8% / 75.2%	98	View · PDB TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:305:456_2i13_A_1
5	5ei9	259:462	321	430	P:E · DNA:A,B	56.8% / 70.3%	99	View · PDB TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:321:430_5ei9_E_1
2	5v3m	259:462	267	462	P:C · DNA:A,B	49.0% / 64.1%	70	View · PDB TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5v3m_C_1
3	5v3j	259:462	267	462	P:E · DNA:A,B	49.0% / 64.1%	70	View · PDB TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5v3j_E_1
4	5wjq	259:462	267	462	P:D · DNA:A,B	49.0% / 63.6%	69	View · PDB TFS_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:267:462_5wjq_D_1
1	1llm	259:462	405,405	458,458	P:C,D · DNA:A,B	44.4% / 61.1%	62,63	View · PDB DIMER_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:405:458_1llm_C_1
2	2wty	259:462	303,303	340,340	P:A,B · DNA:C,D	41.0% / 56.4%	40,39	View · PDB DIMER_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:303:340_2wty_A_1
3	4auw	259:462	303,303	340,340	P:A,B · DNA:C,D	41.0% / 56.4%	43,44	View · PDB DIMER_tr_A0A0C4DFN0_A0A0C4DFN0_HUMAN:303:340_4auw_B_1

Full sequence / unlocalized models6 models

Source	Model	Template	Residues modeled	Actions
Predicted = Low	a0a0c4dfn0.af3.0	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0c4dfn0.af3.1	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0c4dfn0.af3.2	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0c4dfn0.af3.3	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0c4dfn0.af3.4	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0c4dfn0.af3.5	-	Full sequence / not localized	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Imported domain tags16

C1_3CxxC_CxxC_SSSSDUF164DZRFYDLN_acidLIMRad50_zn_hookSCANzf-C2H2zf-C2H2_4zf-C2H2_6zf-C2H2_jazzf-C2HC_2zf-DNA_Polzf-H2C2_2zf-RING_3