ModCRE DB

Transcription factor

A0A0C4DG37 - ZNF439

Zinc finger protein 439

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 363 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07627_2.00 Known CisBP CAGTCACCTTCTGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 363 aa
208-351

Region 208-351 0 PWM

Residues
144 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 208-3511 model
Actions
Predicted = Low TFS_A0A0C4DG37:208:351_2i13_A_1 2i13 208-351 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
106-128PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
190-212PF00096Zinc finger, C2H2 typeoverlaps 208-351
218-240PF00096Zinc finger, C2H2 typeoverlaps 208-351
246-268PF00096Zinc finger, C2H2 typeoverlaps 208-351
274-296PF00096Zinc finger, C2H2 typeoverlaps 208-351
302-324PF00096Zinc finger, C2H2 typeoverlaps 208-351