ModCRE DB

Transcription factor

A0A0C4DG42 - ZNF34

Zinc finger protein 34

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 539 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M08371_2.00 Known CisBP CCAGACTTGTCCTCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 539 aa
230-505

Region 230-505 0 PWM

Residues
276 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 230-5051 model
Actions
Predicted = Low TFS_A0A0C4DG42:230:505_5v3j_E_1 5v3j 230-505 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
14-54PF01352KRAB boxNo overlap with loaded model regions
174-196PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
230-252PF00096Zinc finger, C2H2 typeoverlaps 230-505
258-280PF00096Zinc finger, C2H2 typeoverlaps 230-505
286-308PF00096Zinc finger, C2H2 typeoverlaps 230-505
314-336PF00096Zinc finger, C2H2 typeoverlaps 230-505
342-364PF00096Zinc finger, C2H2 typeoverlaps 230-505
370-392PF00096Zinc finger, C2H2 typeoverlaps 230-505
398-420PF00096Zinc finger, C2H2 typeoverlaps 230-505
426-448PF00096Zinc finger, C2H2 typeoverlaps 230-505
454-476PF00096Zinc finger, C2H2 typeoverlaps 230-505
482-504PF00096Zinc finger, C2H2 typeoverlaps 230-505
510-532PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions