ModCRE DB

Transcription factor

A0A0G2JQ90 - ZNF43

Zinc finger protein 43

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 475 aa

151 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)11
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 76.1% identity Open · Scan
M07767_2.00 NN 70+% CisBP AAAAACCCCAGA 75.0% identity Open · Scan
M08934_2.00 NN 70+% CisBP GCTGTACCTGCTTATTAGGC 72.5% identity Open · Scan
M04480_2.00 NN 70+% CisBP ATTGATTACCCACCCTAC 71.4% identity Open · Scan
M07595_2.00 NN 70+% CisBP GCCTGTTCCTCTCCC 71.4% identity Open · Scan
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 71.3% identity Open · Scan
M00619_2.00 NN 70+% CisBP TAAATCACGG 70.3% identity Open · Scan
M04524_2.00 NN 70+% CisBP TAAATCACTGCATTTCACTCA 70.3% identity Open · Scan
MA0038.1 NN 70+% JASPAR CAAATCACTG 70.3% identity Open · Scan
MA0038.2 NN 70+% JASPAR CAAATCACTGCA 70.3% identity Open · Scan
MA0483.1 NN 70+% JASPAR AAATCACAGCA 70.3% identity Open · Scan
Nearest Neighbor (70% - 40%)140
MotifPredictionSourceDNA bindingSupportLogoActions
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 69.2% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 67.8% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 67.8% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 67.8% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 67.8% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 67.8% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 67.8% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 67.8% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 66.6% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 65.2% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 64.2% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 64.2% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 64.2% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 64.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.8% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 62.9% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 62.3% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 62.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.4% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 60.7% identity Open · Scan
M06087_2.00 NN 70-40% CisBP ACCACCTGTTGCA 60.7% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 60.7% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 60.7% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 60.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 60.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 60.0% identity Open · Scan
M06053_2.00 NN 70-40% CisBP GAAGCCATAACGGC 60.0% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 59.5% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 59.4% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 59.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 59.2% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 59.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.0% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 58.4% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 58.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 58.1% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 58.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.8% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 57.7% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 57.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 57.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 57.3% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 57.1% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 57.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.1% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 57.1% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 57.1% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 56.8% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.7% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 56.5% identity Open · Scan
M08365_2.00 NN 70-40% CisBP GCCAGCAGCCATCAG 56.5% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.4% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 56.4% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 56.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.2% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 56.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.0% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 56.0% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 55.9% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 55.7% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 55.5% identity Open · Scan
MA0738.1 NN 70-40% JASPAR ATGCCCACC 55.5% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 55.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 55.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.0% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 55.0% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 54.8% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 54.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 54.6% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 54.5% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.5% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 54.3% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 54.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 54.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 54.2% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 54.2% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 54.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 54.0% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 53.9% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 53.6% identity Open · Scan
M00620_2.00 NN 70-40% CisBP TAGTGTAATA 53.5% identity Open · Scan
M02938_2.00 NN 70-40% CisBP ATTAACCCTTTCT 53.5% identity Open · Scan
MA1657.1 NN 70-40% JASPAR GAAAGAGTTAAA 53.5% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.3% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 53.3% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 53.3% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 53.3% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 53.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.2% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 53.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.9% identity Open · Scan
M07666_2.00 NN 70-40% CisBP ATCTAGCCCCTGCCTACC 52.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.5% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 52.4% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.3% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 52.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.3% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 52.0% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 52.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.0% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 52.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.0% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 51.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.9% identity Open · Scan
M01468_2.00 NN 70-40% CisBP TTACCCCTGA 51.8% identity Open · Scan
M04568_2.00 NN 70-40% CisBP CGTGCCAACC 51.8% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 51.8% identity Open · Scan
MA0739.1 NN 70-40% JASPAR ATGCCAACC 51.8% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.7% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.7% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 51.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 51.3% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 51.2% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 51.1% identity Open · Scan
M01540_2.00 NN 70-40% CisBP CTCCCCC 50.9% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.9% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.7% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.6% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.4% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.3% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.0% identity Open · Scan
M01192_2.00 NN 70-40% CisBP CCCCCTGA 50.0% identity Open · Scan
M01868_2.00 NN 70-40% CisBP TCTTGGCG 50.0% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 50.0% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 50.0% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.0% identity Open · Scan
M08358_2.00 NN 70-40% CisBP CCCTCCCCCTCC 50.0% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 475 aa
120-278

Region 120-278 0 PWM

Residues
159 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 120-2781 model
Actions
Predicted = Low TFS_A0A0G2JQ90:120:278_5t0u_A_1 5t0u 120-278 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-30PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
36-58PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
64-86PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
92-114PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
120-142PF00096Zinc finger, C2H2 typeoverlaps 120-278
148-170PF00096Zinc finger, C2H2 typeoverlaps 120-278
176-198PF00096Zinc finger, C2H2 typeoverlaps 120-278
204-226PF00096Zinc finger, C2H2 typeoverlaps 120-278
232-254PF00096Zinc finger, C2H2 typeoverlaps 120-278
260-282PF00096Zinc finger, C2H2 typeoverlaps 120-278
288-310PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
316-338PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
344-366PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
372-394PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
400-422PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
428-450PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions