ModCRE DB

Transcription factor

A0A0G2JS52

Myelin transcription factor 1 domain-containing protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 829 aa

8 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A0G2JS52_A0A0G2JS52_HUMAN:598:681_2mf8_A_1 ModCRE Homology model TCAAAAAGTTTTA Region 598-681 · 1 3D model Open · Scan
TFS_tr_A0A0G2JS52_A0A0G2JS52_HUMAN:654:681_2jx1_A_1 ModCRE Homology model TAAAAAAG Region 654-681 · 1 3D model Open · Scan
a0a0g2js52.af3.0 ModCRE AlphaFold3 model GAAAGACCCCTCGACCGCCCTCAAGTGGGA AlphaFold3 model · ModCRE PWM Open · Scan
a0a0g2js52.af3.1 ModCRE AlphaFold3 model TATTTGTGGGGGGGTCACGGTAACAGACTC AlphaFold3 model · ModCRE PWM Open · Scan
a0a0g2js52.af3.2 ModCRE AlphaFold3 model GAAAGACCCCTCGACCGCCCTCAAGTGGGA AlphaFold3 model · ModCRE PWM Open · Scan
a0a0g2js52.af3.3 ModCRE AlphaFold3 model CCCGACCCCCGAGTGGACCGTTGAGTGCGC AlphaFold3 model · ModCRE PWM Open · Scan
a0a0g2js52.af3.4 ModCRE AlphaFold3 model AGAACTGGGCCCGGCTCTTGGACATCATTT AlphaFold3 model · ModCRE PWM Open · Scan
a0a0g2js52.af3.5 ModCRE AlphaFold3 model TTTATAACTAGCAGCTCTAACGGCCTGTGT AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 829 aa
505-579
598-681

Region 505-579 0 PWM

Residues
75 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs · 2 summary rows
Templates
2JX1, 2MF8
Sources
Predicted = Low

Region 598-681 2 PWM

Residues
84 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs
Templates
2JX1, 2MF8
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 2 summary rows
Region 505-5792 models · 2 summary rows
Actions
Predicted = Low TFS_tr_A0A0G2JS52_A0A0G2JS52_HUMAN:505:579_2mf8_A_1 2mf8 505-579 View model · PDB
Predicted = Low TFS_tr_A0A0G2JS52_A0A0G2JS52_HUMAN:549:579_2jx1_A_1 2jx1 549-579 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 2mf8 505:579 505 579 P:A · DNA:B,C 100.0% / 100.0% 100 View · PDB TFS_tr_A0A0G2JS52_A0A0G2JS52_HUMAN:505:579_2mf8_A_1
2 2jx1 505:579 549 579 P:A · DNA:B,C 100.0% / 100.0% 100 View · PDB TFS_tr_A0A0G2JS52_A0A0G2JS52_HUMAN:549:579_2jx1_A_1
Region 598-6812 models
Actions
Predicted = Low TFS_tr_A0A0G2JS52_A0A0G2JS52_HUMAN:598:681_2mf8_A_1 2mf8 598-681 View model · PDB
Predicted = Low TFS_tr_A0A0G2JS52_A0A0G2JS52_HUMAN:654:681_2jx1_A_1 2jx1 654-681 View model · PDB
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a0g2js52.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0g2js52.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0g2js52.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0g2js52.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0g2js52.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0g2js52.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
149-175PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
193-221PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
268-323PF08474Myelin transcription factor 1No overlap with loaded model regions
324-498PF08474Myelin transcription factor 1No overlap with loaded model regions
508-535PF01530Zinc finger, C2HC typeoverlaps 505-579
551-579PF01530Zinc finger, C2HC typeoverlaps 505-579
600-628PF01530Zinc finger, C2HC typeoverlaps 598-681
654-681PF01530Zinc finger, C2HC typeoverlaps 598-681