ModCRE DB

Transcription factor

A0A0J9YWD6 - DEAF1

DEAF1 transcription factor

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 161 aa

9 Generated PWM 8 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07544_2.00 NN 70-40% CisBP CACGAA 52.0% identity Open · Scan
ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0A0J9YWD6_A0A0J9YWD6_HUMAN:100:148_4iqr_A_1 ModCRE Homology model GTGATCATTGATCACTCCG Region 100-148 · 1 3D model Open · Scan
TFS_tr_A0A0J9YWD6_A0A0J9YWD6_HUMAN:100:148_4iqr_A_1 ModCRE Homology model GTGATCATTGATCACTCCG Region 100-148 · 1 3D model Open · Scan
a0a0j9ywd6.af3.0 ModCRE AlphaFold3 model CTTCTTTGACCCCCCCCCGGG AlphaFold3 model · ModCRE PWM Open · Scan
a0a0j9ywd6.af3.1 ModCRE AlphaFold3 model CTTCTTTGACCCCCCCCCGGG AlphaFold3 model · ModCRE PWM Open · Scan
a0a0j9ywd6.af3.2 ModCRE AlphaFold3 model ACCCGGGGGCGGGCCCAGCCG AlphaFold3 model · ModCRE PWM Open · Scan
a0a0j9ywd6.af3.3 ModCRE AlphaFold3 model GGGGACCCCGCGGCCCCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a0j9ywd6.af3.4 ModCRE AlphaFold3 model CCCACTTGGACTCCCCCCCCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a0j9ywd6.af3.5 ModCRE AlphaFold3 model AACAACCGGCCTGCGCGCCCGCAAAATACG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 161 aa
100-148

Region 100-148 2 PWM

Residues
49 aa
Domains
PF01753 · MYND finger
3D models
2 active PDBs · 2 summary rows
Templates
4IQR
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models 2 summary rows
Region 100-1482 models · 2 summary rows
Actions
Predicted = Low DIMER_tr_A0A0J9YWD6_A0A0J9YWD6_HUMAN:100:148_4iqr_A_1 4iqr 100-148 View model · PDB
Predicted = Low TFS_tr_A0A0J9YWD6_A0A0J9YWD6_HUMAN:100:148_4iqr_A_1 4iqr 100-148 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 4iqr 100:148 100,100 148,148 P:A,B · DNA:C,D 28.6% / 40.8% 16,15 View · PDB DIMER_tr_A0A0J9YWD6_A0A0J9YWD6_HUMAN:100:148_4iqr_A_1
1 4iqr 100:148 100,100 148,148 P:A,B · DNA:C,D 28.6% / 40.8% 16,15 View · PDB TFS_tr_A0A0J9YWD6_A0A0J9YWD6_HUMAN:100:148_4iqr_A_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a0j9ywd6.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0j9ywd6.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0j9ywd6.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0j9ywd6.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0j9ywd6.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0j9ywd6.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
100-136PF01753MYND fingeroverlaps 100-148