ModCRE DB

Transcription factor

A0A0S2Q0B1 - ARID1A

UniProtKB entry deleted

8 Generated PWM 8 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A0S2Q0B1_A0A0S2Q0B1_HUMAN:1006:1127_1kqq_A_1 ModCRE Homology model ATGACAAAATAA Region 1006-1127 · 1 3D model Open · Scan
TFS_tr_A0A0S2Q0B1_A0A0S2Q0B1_HUMAN:1030:1114_2oeh_A_1 ModCRE Homology model TTTAAGCGATGAA Region 1030-1114 · 1 3D model Open · Scan
a0a0s2q0b1.af3.0 ModCRE AlphaFold3 model ATTTTTCCAAAATCCAGA AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2q0b1.af3.1 ModCRE AlphaFold3 model AAAAAAAATCAAATTCAACAAAAAAAAAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2q0b1.af3.2 ModCRE AlphaFold3 model AACTATGGGACACCCGGGACACAAAGTGTG AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2q0b1.af3.3 ModCRE AlphaFold3 model AATTGAGAACAAATTTAAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2q0b1.af3.4 ModCRE AlphaFold3 model ACCCCTACCTTTGCAAAAGGGGGGCGCCCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2q0b1.af3.5 ModCRE AlphaFold3 model ATTTTTCCAAAATCCAGA AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

Region 1006-1127 2 PWM

Residues
122 aa
Domains
No overlapping PFAM annotation recorded
3D models
2 active PDBs · 2 summary rows
Templates
1KQQ, 2OEH
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models 2 summary rows
Region 1006-11272 models · 2 summary rows
Actions
Predicted = Low TFS_tr_A0A0S2Q0B1_A0A0S2Q0B1_HUMAN:1006:1127_1kqq_A_1 1kqq 1006-1127 View model · PDB
Predicted = Low TFS_tr_A0A0S2Q0B1_A0A0S2Q0B1_HUMAN:1030:1114_2oeh_A_1 2oeh 1030-1114 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1kqq 1006:1127 1006 1127 P:A · DNA:B,C 32.5% / 60.2% 92 View · PDB TFS_tr_A0A0S2Q0B1_A0A0S2Q0B1_HUMAN:1006:1127_1kqq_A_1
2 2oeh 1006:1127 1030 1114 P:A · DNA:B,C 22.1% / 54.7% 79 View · PDB TFS_tr_A0A0S2Q0B1_A0A0S2Q0B1_HUMAN:1030:1114_2oeh_A_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a0s2q0b1.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2q0b1.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2q0b1.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2q0b1.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2q0b1.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2q0b1.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Imported domain tags2
ARIDDUF3518