Transcription factor

A0A0S2Z4K4 - ZNF213

Zinc finger protein 213 isoform 2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 393 aa

112 Generated PWM 24 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)100

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	69.0% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	69.0% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	67.0% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	65.8% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	65.8% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	65.8% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	64.7% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	64.7% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	63.5% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	62.9% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	60.8% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	59.5% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	59.4% identity		Open · Scan
M07706_2.00	NN 70-40%	CisBP	GTCTTTGAGAGGGCCCAGATGTTGGACTTA	59.4% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	59.1% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	58.0% identity		Open · Scan
M07605_2.00	NN 70-40%	CisBP	TATTTTTTTTTATTTTTTTTTTTTTTTTTT	57.9% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	57.2% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	57.2% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	56.8% identity		Open · Scan
M08917_2.00	NN 70-40%	CisBP	GCTGAGCCATGTGGGGTGCT	56.8% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	56.6% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	56.6% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	56.5% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	56.5% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	56.5% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	56.1% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	55.7% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	55.7% identity		Open · Scan
M08860_2.00	NN 70-40%	CisBP	TCTTATAAGGGCACTAATCCCATT	55.7% identity		Open · Scan
M00764_2.00	NN 70-40%	CisBP	GTCTACAC	55.3% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	55.2% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	55.0% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	55.0% identity		Open · Scan
M07686_2.00	NN 70-40%	CisBP	TAGCTTGTTTCCAGCCAC	55.0% identity		Open · Scan
M08399_2.00	NN 70-40%	CisBP	TACTCTGGGGCCACATGACTC	55.0% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	55.0% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	54.8% identity		Open · Scan
M07601_2.00	NN 70-40%	CisBP	CAGATGCCGGCACCATGCTTC	54.3% identity		Open · Scan
M07729_2.00	NN 70-40%	CisBP	CCAGACTGCCTGCCAAAACCCCCT	54.3% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	54.0% identity		Open · Scan
M07678_2.00	NN 70-40%	CisBP	CCCGCCCCCTCCTCCCCCTTCCCACCC	53.9% identity		Open · Scan
M08357_2.00	NN 70-40%	CisBP	GAGCCTGCTACTGAGCCTGGG	53.8% identity		Open · Scan
M08256_2.00	NN 70-40%	CisBP	GTGCCTT	53.6% identity		Open · Scan
M08274_2.00	NN 70-40%	CisBP	TTACTTGCAGCCCAACGCATTCCTAAC	53.6% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	53.6% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	53.6% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	53.5% identity		Open · Scan
M07703_2.00	NN 70-40%	CisBP	CCGACGG	53.3% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	53.2% identity		Open · Scan
M08247_2.00	NN 70-40%	CisBP	AAAAATAACAAACGG	53.2% identity		Open · Scan
MA1594.1	NN 70-40%	JASPAR	AGGGGACATCACTACAGATCCCAC	53.2% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	53.1% identity		Open · Scan
M08279_2.00	NN 70-40%	CisBP	CCTCCCTCC	53.1% identity		Open · Scan
M08245_2.00	NN 70-40%	CisBP	TGGTGCCTTATTCCC	53.0% identity		Open · Scan
M04475_2.00	NN 70-40%	CisBP	GATGCACGTACCGTGCCTCA	52.8% identity		Open · Scan
M08292_2.00	NN 70-40%	CisBP	TGTATTCCTTGTCATGTGTGG	52.8% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	52.8% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	52.7% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	52.7% identity		Open · Scan
M01442_2.00	NN 70-40%	CisBP	ACCCCACATT	52.5% identity		Open · Scan
M08300_2.00	NN 70-40%	CisBP	CTGCCCAATTCAT	52.5% identity		Open · Scan
M08386_2.00	NN 70-40%	CisBP	GCCTTAAAAGCTCAGCAC	52.5% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	52.4% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	52.3% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	52.1% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	52.1% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	52.1% identity		Open · Scan
MA1600.1	NN 70-40%	JASPAR	ATACAGTCCACCCCTTTA	52.1% identity		Open · Scan
M07699_2.00	NN 70-40%	CisBP	GGTTTAT	52.0% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	51.8% identity		Open · Scan
M06135_2.00	NN 70-40%	CisBP	CAGCCACGCCCACCT	51.8% identity		Open · Scan
M06179_2.00	NN 70-40%	CisBP	TAAGCCTATAGA	51.8% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	51.8% identity		Open · Scan
M04610_2.00	NN 70-40%	CisBP	CGGCGACGCGAACAC	51.7% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	51.7% identity		Open · Scan
M07567_2.00	NN 70-40%	CisBP	CCACTCCACTCA	51.7% identity		Open · Scan
M07600_2.00	NN 70-40%	CisBP	GCATTAGC	51.7% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	51.7% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	51.7% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	51.7% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	51.4% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	51.4% identity		Open · Scan
M07685_2.00	NN 70-40%	CisBP	CTTTCCAGCCAC	51.4% identity		Open · Scan
M07720_2.00	NN 70-40%	CisBP	TGTGTGTGTGGGCATGTGTGTGTGCGAGT	51.4% identity		Open · Scan
M07727_2.00	NN 70-40%	CisBP	CGCCGCCTCCCC	51.4% identity		Open · Scan
M07746_2.00	NN 70-40%	CisBP	CAGCTGGCGCCCAACATGGGTCCC	51.4% identity		Open · Scan
M08358_2.00	NN 70-40%	CisBP	CCCTCCCCCTCC	51.4% identity		Open · Scan
MA1596.1	NN 70-40%	JASPAR	GCCTCAGCCTCCCGAG	51.4% identity		Open · Scan
M00769_2.00	NN 70-40%	CisBP	ACTCCCCC	51.2% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	51.1% identity		Open · Scan
M01474_2.00	NN 70-40%	CisBP	CGCCGATCAC	51.0% identity		Open · Scan
M07607_2.00	NN 70-40%	CisBP	GGCTCCACG	50.7% identity		Open · Scan
M08335_2.00	NN 70-40%	CisBP	AGTCGTTGTCTG	50.7% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	50.6% identity		Open · Scan
M08291_2.00	NN 70-40%	CisBP	AATCCAGCCCTAGACTCTCCC	50.6% identity		Open · Scan
M05853_2.00	NN 70-40%	CisBP	CCACCTTTAGCCATATCT	50.3% identity		Open · Scan
M01456_2.00	NN 70-40%	CisBP	GTGATCGGCG	50.0% identity		Open · Scan
M01883_2.00	NN 70-40%	CisBP	TGCCCCTGA	50.0% identity		Open · Scan
M07691_2.00	NN 70-40%	CisBP	CCTGCAGCCACCTTGGCCTTG	50.0% identity		Open · Scan

ModCRE12

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
DIMER_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:305:356_1llm_D_1	ModCRE	Homology model	TACGCGCCCGGC	Region 305-356 · 1 3D model		Open · Scan
TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:358_5ei9_E_1	ModCRE	Homology model	GGCCCGGCCCCCCGGGC	Region 248-358 · 1 3D model		Open · Scan
TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5v3j_E_1	ModCRE	Homology model	AGGCCCCCGGCCCCCCGCGCCCG	Region 248-385 · 1 3D model		Open · Scan
TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5v3m_C_1	ModCRE	Homology model	GCTTCCGCCCCCCCTCCGACAA	Region 248-385 · 1 3D model		Open · Scan
TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5wjq_D_1	ModCRE	Homology model	CCCCGCCCCCCCCTTCCCCC	Region 248-385 · 1 3D model		Open · Scan
TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:249:385_2i13_A_1	ModCRE	Homology model	GTTACTCTGTAGCTAGCGGAC	Region 249-385 · 1 3D model		Open · Scan
a0a0s2z4k4.af3.0	ModCRE	AlphaFold3 model	CTCGGAGGGGGGGGGGCCCCC	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0s2z4k4.af3.1	ModCRE	AlphaFold3 model	GTGGGAGGGGGGGGGCCGCGG	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0s2z4k4.af3.2	ModCRE	AlphaFold3 model	GTTGGAGGAGGGGGGCCCGGC	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0s2z4k4.af3.3	ModCRE	AlphaFold3 model	CCGGGGCCCCCCCCCTCCCGACTT	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0s2z4k4.af3.4	ModCRE	AlphaFold3 model	CTCGGAGGGGGGGGGGCCCCC	AlphaFold3 model · ModCRE PWM		Open · Scan
a0a0s2z4k4.af3.5	ModCRE	AlphaFold3 model	CCGGGGCCCCCCCCCTTCTCCCCGG	AlphaFold3 model · ModCRE PWM		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 393 aa

248-385

Region 248-385 6 PWM

Residues

138 aa

Domains

PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

6 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

24 active PDB models 6 summary rows

Region 248-3856 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:305:356_1llm_D_1	1llm	305-356	View model · PDB
Predicted = Low	TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:358_5ei9_E_1	5ei9	248-358	View model · PDB
Predicted = Low	TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5v3j_E_1	5v3j	248-385	View model · PDB
Predicted = Low	TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5v3m_C_1	5v3m	248-385	View model · PDB
Predicted = Low	TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5wjq_D_1	5wjq	248-385	View model · PDB
Predicted = Low	TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:249:385_2i13_A_1	2i13	249-385	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
1	2i13	239:387	249	385	P:A · DNA:C,D	59.9% / 70.8%	90	View · PDB TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:249:385_2i13_A_1
5	5ei9	239:387	248	358	P:E · DNA:A,B	56.8% / 70.3%	100	View · PDB TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:358_5ei9_E_1
2	5wjq	239:387	248	385	P:D · DNA:A,B	52.2% / 72.5%	48	View · PDB TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5wjq_D_1
3	5v3m	239:387	248	385	P:C · DNA:A,B	52.2% / 67.4%	49	View · PDB TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5v3m_C_1
4	5v3j	239:387	248	385	P:E · DNA:A,B	52.2% / 67.4%	49	View · PDB TFS_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:248:385_5v3j_E_1
1	1llm	239:387	305,305	356,356	P:C,D · DNA:A,B	48.1% / 59.6%	59,61	View · PDB DIMER_tr_A0A0S2Z4K4_A0A0S2Z4K4_HUMAN:305:356_1llm_D_1

Full sequence / unlocalized models18 models

Source	Model	Template	Residues modeled	Actions
Predicted = Low	a0a0s2z4k4.af3.0	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4.af3.1	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4.af3.2	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4.af3.3	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4.af3.4	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4.af3.5	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_dimer.af3.0	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_dimer.af3.1	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_dimer.af3.2	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_dimer.af3.3	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_dimer.af3.4	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_dimer.af3.5	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_monomer.af3.0	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_monomer.af3.1	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_monomer.af3.2	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_monomer.af3.3	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_monomer.af3.4	-	Full sequence / not localized	View model · PDB
Predicted = Low	a0a0s2z4k4_monomer.af3.5	-	Full sequence / not localized	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
41-127	PF02023	SCAN domain	No overlap with loaded model regions
266-289	PF13465	Zinc-finger double domain	overlaps 248-385
307-329	PF00096	Zinc finger, C2H2 type	overlaps 248-385
337-357	PF00096	Zinc finger, C2H2 type	overlaps 248-385
365-385	PF00096	Zinc finger, C2H2 type	overlaps 248-385