ModCRE DB

Transcription factor

A0A0S2Z4L6 - ZNF213

Zinc finger protein 213 isoform 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 459 aa

138 Generated PWM 24 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)126
MotifPredictionSourceDNA bindingSupportLogoActions
M00948_2.00 NN 70-40% CisBP GCAGCACC 69.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 69.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.5% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 62.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 60.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 59.5% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 59.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 59.1% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 58.6% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 58.0% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 57.9% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 57.8% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 57.2% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 57.2% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 57.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 56.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 56.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.5% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 56.5% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 56.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 56.5% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 56.2% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 56.1% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 55.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.7% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.7% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 55.3% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 55.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 55.2% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 55.0% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 55.0% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 55.0% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 55.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 55.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 54.8% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 54.5% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 54.3% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 54.3% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 54.3% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 54.3% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 54.2% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 54.0% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 53.9% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 53.8% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 53.8% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 53.6% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 53.6% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.5% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 53.4% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 53.4% identity Open · Scan
M07703_2.00 NN 70-40% CisBP CCGACGG 53.3% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.2% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 53.2% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 53.2% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 53.2% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 53.1% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 52.8% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.8% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 52.8% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 52.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 52.8% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 52.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 52.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.7% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 52.5% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 52.5% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 52.5% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 52.4% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 52.1% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 52.1% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 52.1% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 52.1% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 52.1% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 52.1% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 52.1% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.8% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M07634_2.00 NN 70-40% CisBP AAACGTCCACG 51.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.8% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 51.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.7% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 51.7% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.7% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 51.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 51.7% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 51.7% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.4% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 51.4% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 51.4% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 51.4% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 51.4% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 51.4% identity Open · Scan
M08358_2.00 NN 70-40% CisBP CCCTCCCCCTCC 51.4% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 51.4% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 51.3% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 51.3% identity Open · Scan
M00769_2.00 NN 70-40% CisBP ACTCCCCC 51.2% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M04615_2.00 NN 70-40% CisBP CTCGATCGAAGGGCACAGTCATT 51.0% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 50.7% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.7% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 50.7% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 50.7% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 50.7% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 50.7% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 50.6% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.3% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 50.3% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 50.0% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 50.0% identity Open · Scan
ModCRE12
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:371:422_1llm_D_1 ModCRE Homology model GCCGGGCGCGTA Region 371-422 · 1 3D model Open · Scan
TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:424_5ei9_E_1 ModCRE Homology model GCCCCGGGGGGCGGGCC Region 314-424 · 1 3D model Open · Scan
TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5v3j_E_1 ModCRE Homology model CGGGCGCGGGGGGCCCGGGGCCT Region 314-451 · 1 3D model Open · Scan
TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5v3m_C_1 ModCRE Homology model TTGTCGGAGGGGGGGCGGAAGC Region 314-451 · 1 3D model Open · Scan
TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5wjq_D_1 ModCRE Homology model GGGGGAAGGGGGGGGCGGGG Region 314-451 · 1 3D model Open · Scan
TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:315:451_2i13_A_1 ModCRE Homology model GTTACTCTGTAGCTAGCGGTC Region 315-451 · 1 3D model Open · Scan
a0a0s2z4l6.af3.0 ModCRE AlphaFold3 model GTGGGAGGGGGGGGGCCCCCG AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2z4l6.af3.1 ModCRE AlphaFold3 model AAGGGGGGAGGAGGGGGGCCCGGC AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2z4l6.af3.2 ModCRE AlphaFold3 model CCGGGGCCCCCCCCCTACTCACA AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2z4l6.af3.3 ModCRE AlphaFold3 model GTGGGAGGGGGGGGGCCCCCG AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2z4l6.af3.4 ModCRE AlphaFold3 model CCGGGCCCCCCCCCCCTCTCACGCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a0s2z4l6.af3.5 ModCRE AlphaFold3 model CCGGGGCCCCCCCCCCCCGAACGG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 459 aa
314-451

Region 314-451 6 PWM

Residues
138 aa
Domains
PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
24 active PDB models 6 summary rows
Region 314-4516 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:371:422_1llm_D_1 1llm 371-422 View model · PDB
Predicted = Low TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:424_5ei9_E_1 5ei9 314-424 View model · PDB
Predicted = Low TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5v3j_E_1 5v3j 314-451 View model · PDB
Predicted = Low TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5v3m_C_1 5v3m 314-451 View model · PDB
Predicted = Low TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5wjq_D_1 5wjq 314-451 View model · PDB
Predicted = Low TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:315:451_2i13_A_1 2i13 315-451 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 2i13 305:453 315 451 P:A · DNA:C,D 59.9% / 70.8% 90 View · PDB TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:315:451_2i13_A_1
5 5ei9 305:453 314 424 P:E · DNA:A,B 56.8% / 70.3% 100 View · PDB TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:424_5ei9_E_1
2 5wjq 305:453 314 451 P:D · DNA:A,B 52.2% / 72.5% 48 View · PDB TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5wjq_D_1
3 5v3m 305:453 314 451 P:C · DNA:A,B 52.2% / 67.4% 49 View · PDB TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5v3m_C_1
4 5v3j 305:453 314 451 P:E · DNA:A,B 52.2% / 67.4% 49 View · PDB TFS_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:314:451_5v3j_E_1
1 1llm 305:453 371,371 422,422 P:C,D · DNA:A,B 48.1% / 59.6% 59,61 View · PDB DIMER_tr_A0A0S2Z4L6_A0A0S2Z4L6_HUMAN:371:422_1llm_D_1
Full sequence / unlocalized models18 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a0s2z4l6.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_dimer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_dimer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_dimer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_dimer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_dimer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_dimer.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_monomer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_monomer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_monomer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_monomer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_monomer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a0s2z4l6_monomer.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
41-127PF02023SCAN domainNo overlap with loaded model regions
202-237PF01352KRAB boxNo overlap with loaded model regions
332-355PF13465Zinc-finger double domainoverlaps 314-451
373-395PF00096Zinc finger, C2H2 typeoverlaps 314-451
403-423PF00096Zinc finger, C2H2 typeoverlaps 314-451
431-451PF00096Zinc finger, C2H2 typeoverlaps 314-451