Region 156-216 0 PWM
- Residues
- 61 aa
- Domains
- PF00046 · Homeodomain
- 3D models
- 1 active PDB
- Templates
- 5HOD
- Sources
- Structure model
Transcription factor
A0A0S2Z5S4 - LHX4
LIM homeobox 4 isoform 1
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 390 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M05065_2.00 | Known | CisBP | TTAACGAG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
390 aa
156-216
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 156-2161 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_A0A0S2Z5S4:156:216_5hod_A_1 | 5hod | 156-216 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 30-85 | PF00412 | LIM domain | No overlap with loaded model regions |
| 89-146 | PF00412 | LIM domain | No overlap with loaded model regions |
| 158-214 | PF00046 | Homeodomain | overlaps 156-216 |