ModCRE DB

Transcription factor

A0A140TA70 - SALL3

Sal-like protein 3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1300 aa

22 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08979_2.00 NN 70+% CisBP CCCACCCTCC 84.5% identity Open · Scan
Nearest Neighbor (70% - 40%)21
MotifPredictionSourceDNA bindingSupportLogoActions
M08397_2.00 NN 70-40% CisBP ATGCAACAGGTG 57.6% identity Open · Scan
MA0743.1 NN 70-40% JASPAR GAGCAACAGGTGGTT 57.6% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 57.6% identity Open · Scan
M09002_2.00 NN 70-40% CisBP CCACCTGG 57.1% identity Open · Scan
MA1558.1 NN 70-40% JASPAR GGCAGGTGCA 57.1% identity Open · Scan
M06087_2.00 NN 70-40% CisBP ACCACCTGTTGCA 56.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.6% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 56.6% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 55.1% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 55.1% identity Open · Scan
M03691_2.00 NN 70-40% CisBP ATGCAACAGGTGG 54.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.5% identity Open · Scan
M00021_2.00 NN 70-40% CisBP TACCCCACAC 53.6% identity Open · Scan
M10203_2.00 NN 70-40% CisBP CCCCAAACCACCCC 52.9% identity Open · Scan
MA0073.1 NN 70-40% JASPAR CCCCAAACCACCCCCCCCCA 52.9% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 52.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 52.8% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 52.8% identity Open · Scan
M00608_2.00 NN 70-40% CisBP CCTGTTG 50.9% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1300 aa
678-729

Region 678-729 0 PWM

Residues
52 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1G2D
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 678-7291 model
Actions
Predicted = Low TFS_A0A140TA70:678:729_1g2d_C_1 1g2d 678-729 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
448-470PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
707-729PF00096Zinc finger, C2H2 typeoverlaps 678-729
739-761PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
978-999PF12874Zinc-finger of C2H2 typeNo overlap with loaded model regions
1113-1135PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
1143-1163PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions