ModCRE DB

Transcription factor

A0A1B0GV48 - ZBTB38

Zinc finger and BTB domain-containing protein 38

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 725 aa

16 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0591.1 NN 70-40% JASPAR AGGATGACTCAGCAC 56.8% identity Open · Scan
M04651_2.00 NN 70-40% CisBP TTCACTATTATAGTGAA 53.4% identity Open · Scan
M00135_2.00 NN 70-40% CisBP AGCCCCCCAA 52.0% identity Open · Scan
MA1633.1 NN 70-40% JASPAR GATGACTCAGCAA 50.8% identity Open · Scan
ModCRE12
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:460:506_1llm_C_1 ModCRE Homology model CCCCCCGGGGGG Region 460-506 · 1 3D model Open · Scan
TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_2lt7_A_1 ModCRE Homology model GACTTCCCCGAAACTCG Region 448-542 · 1 3D model Open · Scan
TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmv_A_1 ModCRE Homology model CCTATCCCGCGAACCC Region 448-542 · 1 3D model Open · Scan
TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmx_A_1 ModCRE Homology model CGATCCCAGAAAAGG Region 448-542 · 1 3D model Open · Scan
TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmy_A_1 ModCRE Homology model TAATCCCGGAAATCG Region 448-542 · 1 3D model Open · Scan
TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_6dfc_A_1 ModCRE Homology model GTATCCCGGGAACTA Region 448-542 · 1 3D model Open · Scan
a0a1b0gv48.af3.0 ModCRE AlphaFold3 model CTATTCGCGCGCAAGACT AlphaFold3 model · ModCRE PWM Open · Scan
a0a1b0gv48.af3.1 ModCRE AlphaFold3 model CTATTCGCGCGCAAGACT AlphaFold3 model · ModCRE PWM Open · Scan
a0a1b0gv48.af3.2 ModCRE AlphaFold3 model CCGATTCGGGCAACAGAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a1b0gv48.af3.3 ModCRE AlphaFold3 model CGGATTCCGGCGCGAGAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a1b0gv48.af3.4 ModCRE AlphaFold3 model AGGGGTCGCCGCTTCTTGCAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a1b0gv48.af3.5 ModCRE AlphaFold3 model AGTGCGTCCGCGATTCAG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 725 aa
448-542

Region 448-542 6 PWM

Residues
95 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2LT7, 5VMV, 5VMX, 5VMY, 6DFC
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 448-5426 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:460:506_1llm_C_1 1llm 460-506 View model · PDB
Predicted = Low TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_2lt7_A_1 2lt7 448-542 View model · PDB
Predicted = Low TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmv_A_1 5vmv 448-542 View model · PDB
Predicted = Low TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmx_A_1 5vmx 448-542 View model · PDB
Predicted = Low TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmy_A_1 5vmy 448-542 View model · PDB
Predicted = Low TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_6dfc_A_1 6dfc 448-542 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 5vmv 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 81 View · PDB TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmv_A_1
2 2lt7 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 71 View · PDB TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_2lt7_A_1
3 5vmx 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 77 View · PDB TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmx_A_1
4 6dfc 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 81 View · PDB TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_6dfc_A_1
5 5vmy 447:542 448 542 P:A · DNA:D,E 60.0% / 75.8% 78 View · PDB TFS_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:448:542_5vmy_A_1
1 1llm 447:542 460,460 506,506 P:C,D · DNA:A,B 27.7% / 48.9% 54,55 View · PDB DIMER_tr_A0A1B0GV48_A0A1B0GV48_HUMAN:460:506_1llm_C_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a1b0gv48.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a1b0gv48.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a1b0gv48.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a1b0gv48.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a1b0gv48.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a1b0gv48.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
23-125PF00651BTB/POZ domainNo overlap with loaded model regions
460-482PF00096Zinc finger, C2H2 typeoverlaps 448-542