ModCRE DB

Transcription factor

A0A1B0GVV8 - ZEB2

Zinc finger E-box-binding homeobox 2 (Smad-interacting protein 1) (Zinc finger homeobox protein 1b)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1102 aa

29 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07842_2.00 NN 70+% CisBP CTCACCTG 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)28
MotifPredictionSourceDNA bindingSupportLogoActions
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 56.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.8% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 53.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 52.7% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 52.1% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 52.1% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 51.5% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 51.4% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 51.4% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 51.3% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 51.3% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 51.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 50.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 50.7% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 50.6% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 50.6% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 50.6% identity Open · Scan
M01468_2.00 NN 70-40% CisBP TTACCCCTGA 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 50.0% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 50.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.0% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 50.0% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1102 aa
547-584

Region 547-584 0 PWM

Residues
38 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
1AU7
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 547-5841 model
Actions
Predicted = Low DIMER_A0A1B0GVV8:547:584_1au7_B_1 1au7 547-584 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
99-150PF05605Drought induced 19 protein (Di19), zinc-bindingNo overlap with loaded model regions
170-192PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
198-218PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
887-909PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
943-963PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions