ModCRE DB

Transcription factor

A0A2R8Y683 - NOBOX

NOBOX oogenesis homeobox

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 390 aa

81 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M02221_2.00 NN 70+% CisBP CTTAATTGGT 80.7% identity Open · Scan
Nearest Neighbor (70% - 40%)80
MotifPredictionSourceDNA bindingSupportLogoActions
MA0125.1 NN 70-40% JASPAR TAATTGGT 66.4% identity Open · Scan
M03076_2.00 NN 70-40% CisBP TTAATTAAATTAA 62.0% identity Open · Scan
M06326_2.00 NN 70-40% CisBP TTAATT 62.0% identity Open · Scan
MA0725.1 NN 70-40% JASPAR CTAATTAT 62.0% identity Open · Scan
MA0874.1 NN 70-40% JASPAR GTCCATTAATTAATGGA 62.0% identity Open · Scan
M10741_2.00 NN 70-40% CisBP AACTAATTACCATTATCG 60.0% identity Open · Scan
MA0634.1 NN 70-40% JASPAR TCTAATTAAA 60.0% identity Open · Scan
MA0854.1 NN 70-40% JASPAR CGAATTAATTAATCACC 60.0% identity Open · Scan
M05419_2.00 NN 70-40% CisBP CGATTAGTCACGGTT 59.5% identity Open · Scan
MA0680.1 NN 70-40% JASPAR TAATCGATTA 59.5% identity Open · Scan
M02111_2.00 NN 70-40% CisBP GTTAATTAG 59.1% identity Open · Scan
MA0721.1 NN 70-40% JASPAR CTAATTAA 59.1% identity Open · Scan
M02079_2.00 NN 70-40% CisBP AATTAATTAGT 58.9% identity Open · Scan
MA0726.1 NN 70-40% JASPAR CTAATTAG 58.9% identity Open · Scan
M03278_2.00 NN 70-40% CisBP TTAATTTAATTAT 58.8% identity Open · Scan
M03876_2.00 NN 70-40% CisBP TAATTAAATTA 58.8% identity Open · Scan
M04917_2.00 NN 70-40% CisBP GTAATTAG 58.8% identity Open · Scan
MA0853.1 NN 70-40% JASPAR CGCATTAATTAATTACC 58.8% identity Open · Scan
M06322_2.00 NN 70-40% CisBP TTAATTA 58.4% identity Open · Scan
M06310_2.00 NN 70-40% CisBP TTAATTA 58.0% identity Open · Scan
M06370_2.00 NN 70-40% CisBP TTAATTA 58.0% identity Open · Scan
M03776_2.00 NN 70-40% CisBP TAATTGAATTA 57.8% identity Open · Scan
M00354_2.00 NN 70-40% CisBP CCGATTA 57.4% identity Open · Scan
M02209_2.00 NN 70-40% CisBP AGCGGATATA 57.4% identity Open · Scan
MA0780.1 NN 70-40% JASPAR TAATCGATTA 57.4% identity Open · Scan
M03851_2.00 NN 70-40% CisBP CTAATTGA 57.1% identity Open · Scan
M00426_2.00 NN 70-40% CisBP GCTAATTGG 56.8% identity Open · Scan
M03204_2.00 NN 70-40% CisBP TTAATTGG 56.8% identity Open · Scan
M05367_2.00 NN 70-40% CisBP TTAATTAG 56.8% identity Open · Scan
MA0630.1 NN 70-40% JASPAR TTAATTGG 56.8% identity Open · Scan
MA0718.1 NN 70-40% JASPAR GCCAATTAAC 56.8% identity Open · Scan
MA0720.1 NN 70-40% JASPAR CTAATTAA 56.8% identity Open · Scan
M06552_2.00 NN 70-40% CisBP TTAATTA 56.1% identity Open · Scan
M00417_2.00 NN 70-40% CisBP GCTAATTA 56.0% identity Open · Scan
M00428_2.00 NN 70-40% CisBP TTAATCCC 56.0% identity Open · Scan
M00440_2.00 NN 70-40% CisBP TTAATCCC 56.0% identity Open · Scan
M04929_2.00 NN 70-40% CisBP CTAATCCG 56.0% identity Open · Scan
M06318_2.00 NN 70-40% CisBP TTAATTA 56.0% identity Open · Scan
MA0681.1 NN 70-40% JASPAR TAATTTAATTA 56.0% identity Open · Scan
MA0682.1 NN 70-40% JASPAR TTAATCCC 56.0% identity Open · Scan
MA0682.2 NN 70-40% JASPAR CTAATCCC 56.0% identity Open · Scan
MA0713.1 NN 70-40% JASPAR TAATTTAATTA 56.0% identity Open · Scan
MA0714.1 NN 70-40% JASPAR CTTAATCCC 56.0% identity Open · Scan
MA1547.1 NN 70-40% JASPAR ATAATCCC 56.0% identity Open · Scan
MA1481.1 NN 70-40% JASPAR CTAATTAC 55.7% identity Open · Scan
M02103_2.00 NN 70-40% CisBP AGGTGTAAA 55.3% identity Open · Scan
M03888_2.00 NN 70-40% CisBP GCGTGACGAATC 55.3% identity Open · Scan
M03828_2.00 NN 70-40% CisBP GTTAATTAACGTTAATTAAC 55.1% identity Open · Scan
M02078_2.00 NN 70-40% CisBP AATTAATTAGT 54.9% identity Open · Scan
M02082_2.00 NN 70-40% CisBP ATTGTACAAT 54.9% identity Open · Scan
M03855_2.00 NN 70-40% CisBP TAATTAGATTA 54.9% identity Open · Scan
M01241_2.00 NN 70-40% CisBP TTAATCCC 54.0% identity Open · Scan
M02123_2.00 NN 70-40% CisBP TTAATCCCT 54.0% identity Open · Scan
M09210_2.00 NN 70-40% CisBP TAATTGAATTA 54.0% identity Open · Scan
M03896_2.00 NN 70-40% CisBP CTAATTAG 53.8% identity Open · Scan
M00402_2.00 NN 70-40% CisBP TAATTAG 53.3% identity Open · Scan
M06555_2.00 NN 70-40% CisBP AGTAACAGT 53.1% identity Open · Scan
M10806_2.00 NN 70-40% CisBP AATTTTCACGCATGAGTTCAC 52.9% identity Open · Scan
MA0069.1 NN 70-40% JASPAR TTCACGCATGAGTT 52.9% identity Open · Scan
MA0654.1 NN 70-40% JASPAR CTAATTAA 52.9% identity Open · Scan
MA0717.1 NN 70-40% JASPAR CCAATTAA 52.9% identity Open · Scan
M00452_2.00 NN 70-40% CisBP GCTAATTG 52.0% identity Open · Scan
M03892_2.00 NN 70-40% CisBP GATAATTGATTATC 52.0% identity Open · Scan
MA0715.1 NN 70-40% JASPAR TAATTTAATTA 52.0% identity Open · Scan
MA0621.1 NN 70-40% JASPAR AATTAATTAGT 51.0% identity Open · Scan
M00349_2.00 NN 70-40% CisBP CTAATTAGC 50.9% identity Open · Scan
MA0068.1 NN 70-40% JASPAR GAAAAATTTCCAATACTCCACTCCCCCCCC 50.9% identity Open · Scan
MA0068.2 NN 70-40% JASPAR CTAATTAG 50.9% identity Open · Scan
M00424_2.00 NN 70-40% CisBP ACTAATTA 50.0% identity Open · Scan
M00515_2.00 NN 70-40% CisBP TTAATCCCCT 50.0% identity Open · Scan
M02097_2.00 NN 70-40% CisBP AATTAATTAG 50.0% identity Open · Scan
M03121_2.00 NN 70-40% CisBP TTAATTGG 50.0% identity Open · Scan
M03236_2.00 NN 70-40% CisBP GTTAATCCGC 50.0% identity Open · Scan
M03819_2.00 NN 70-40% CisBP TAATCCGTTAATCCG 50.0% identity Open · Scan
M09208_2.00 NN 70-40% CisBP CCTAATCCTCTTA 50.0% identity Open · Scan
MA0075.1 NN 70-40% JASPAR AATTA 50.0% identity Open · Scan
MA0075.3 NN 70-40% JASPAR CTAATTAA 50.0% identity Open · Scan
MA0467.1 NN 70-40% JASPAR AAGAGGATTAG 50.0% identity Open · Scan
MA0716.1 NN 70-40% JASPAR CTAATTAA 50.0% identity Open · Scan
MA0883.1 NN 70-40% JASPAR TGAACCGGATTAATGAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 390 aa
13-60

Region 13-60 0 PWM

Residues
48 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1HDD
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 13-601 model
Actions
Predicted = Low DIMER_A0A2R8Y683:13:60_1hdd_D_1 1hdd 13-60 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
13-60PF00046Homeodomainoverlaps 13-60