ModCRE DB

Transcription factor

A0A2R8Y8C8 - NOBOX

NOBOX oogenesis homeobox

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 574 aa

50 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M02221_2.00 NN 70+% CisBP CTTAATTGGT 74.2% identity Open · Scan
Nearest Neighbor (70% - 40%)49
MotifPredictionSourceDNA bindingSupportLogoActions
M03076_2.00 NN 70-40% CisBP TTAATTAAATTAA 59.6% identity Open · Scan
MA0874.1 NN 70-40% JASPAR GTCCATTAATTAATGGA 59.6% identity Open · Scan
M02209_2.00 NN 70-40% CisBP AGCGGATATA 57.4% identity Open · Scan
M06326_2.00 NN 70-40% CisBP TTAATT 56.6% identity Open · Scan
M03776_2.00 NN 70-40% CisBP TAATTGAATTA 56.3% identity Open · Scan
M02103_2.00 NN 70-40% CisBP AGGTGTAAA 55.3% identity Open · Scan
M02111_2.00 NN 70-40% CisBP GTTAATTAG 55.0% identity Open · Scan
M06322_2.00 NN 70-40% CisBP TTAATTA 55.0% identity Open · Scan
MA0721.1 NN 70-40% JASPAR CTAATTAA 55.0% identity Open · Scan
M02079_2.00 NN 70-40% CisBP AATTAATTAGT 53.7% identity Open · Scan
M03828_2.00 NN 70-40% CisBP GTTAATTAACGTTAATTAAC 53.3% identity Open · Scan
M06310_2.00 NN 70-40% CisBP TTAATTA 53.3% identity Open · Scan
M03278_2.00 NN 70-40% CisBP TTAATTTAATTAT 53.2% identity Open · Scan
M04917_2.00 NN 70-40% CisBP GTAATTAG 53.2% identity Open · Scan
MA0853.1 NN 70-40% JASPAR CGCATTAATTAATTACC 53.2% identity Open · Scan
M06552_2.00 NN 70-40% CisBP TTAATTA 52.9% identity Open · Scan
M05419_2.00 NN 70-40% CisBP CGATTAGTCACGGTT 52.6% identity Open · Scan
MA0680.1 NN 70-40% JASPAR TAATCGATTA 52.6% identity Open · Scan
M03876_2.00 NN 70-40% CisBP TAATTAAATTA 52.5% identity Open · Scan
M06370_2.00 NN 70-40% CisBP TTAATTA 52.4% identity Open · Scan
MA0634.1 NN 70-40% JASPAR TCTAATTAAA 52.4% identity Open · Scan
MA0125.1 NN 70-40% JASPAR TAATTGGT 52.1% identity Open · Scan
M00424_2.00 NN 70-40% CisBP ACTAATTA 52.0% identity Open · Scan
M00428_2.00 NN 70-40% CisBP TTAATCCC 51.6% identity Open · Scan
M00440_2.00 NN 70-40% CisBP TTAATCCC 51.6% identity Open · Scan
M03851_2.00 NN 70-40% CisBP CTAATTGA 51.6% identity Open · Scan
M04929_2.00 NN 70-40% CisBP CTAATCCG 51.6% identity Open · Scan
MA0681.1 NN 70-40% JASPAR TAATTTAATTA 51.6% identity Open · Scan
MA0682.1 NN 70-40% JASPAR TTAATCCC 51.6% identity Open · Scan
MA0682.2 NN 70-40% JASPAR CTAATCCC 51.6% identity Open · Scan
MA0713.1 NN 70-40% JASPAR TAATTTAATTA 51.6% identity Open · Scan
MA0714.1 NN 70-40% JASPAR CTTAATCCC 51.6% identity Open · Scan
MA1547.1 NN 70-40% JASPAR ATAATCCC 51.6% identity Open · Scan
M10741_2.00 NN 70-40% CisBP AACTAATTACCATTATCG 51.5% identity Open · Scan
MA0854.1 NN 70-40% JASPAR CGAATTAATTAATCACC 51.5% identity Open · Scan
M00354_2.00 NN 70-40% CisBP CCGATTA 50.8% identity Open · Scan
M00426_2.00 NN 70-40% CisBP GCTAATTGG 50.8% identity Open · Scan
M03204_2.00 NN 70-40% CisBP TTAATTGG 50.8% identity Open · Scan
M05367_2.00 NN 70-40% CisBP TTAATTAG 50.8% identity Open · Scan
MA0630.1 NN 70-40% JASPAR TTAATTGG 50.8% identity Open · Scan
MA0718.1 NN 70-40% JASPAR GCCAATTAAC 50.8% identity Open · Scan
MA0720.1 NN 70-40% JASPAR CTAATTAA 50.8% identity Open · Scan
MA0780.1 NN 70-40% JASPAR TAATCGATTA 50.8% identity Open · Scan
M00417_2.00 NN 70-40% CisBP GCTAATTA 50.7% identity Open · Scan
M01241_2.00 NN 70-40% CisBP TTAATCCC 50.0% identity Open · Scan
M02123_2.00 NN 70-40% CisBP TTAATCCCT 50.0% identity Open · Scan
M03896_2.00 NN 70-40% CisBP CTAATTAG 50.0% identity Open · Scan
M06318_2.00 NN 70-40% CisBP TTAATTA 50.0% identity Open · Scan
MA1481.1 NN 70-40% JASPAR CTAATTAC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 574 aa
187-244

Region 187-244 0 PWM

Residues
58 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 187-2441 model
Actions
Predicted = Low DIMER_A0A2R8Y8C8:187:244_1fjl_A_1 1fjl 187-244 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
188-244PF00046Homeodomainoverlaps 187-244