Transcription factor

A0A2R8YDI1 - CUX1

Homeobox protein cut-like

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1358 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3

Motif	Prediction	Source	DNA binding	Support	Actions
M10426_2.00	NN 70+%	CisBP	GGGATCGATC	92.8% identity	Open · Scan
MA0754.1	NN 70+%	JASPAR	TAATCGATAA	89.3% identity	Open · Scan
M00379_2.00	NN 70+%	CisBP	TTGATCAC	80.0% identity	Open · Scan

Nearest Neighbor (70% - 40%)2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M04676_2.00	NN 70-40%	CisBP	ACGGATCAATAA	59.0% identity		Open · Scan
M01905_2.00	NN 70-40%	CisBP	TTATCGATT	51.5% identity		Open · Scan

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1358 aa

1098-1153

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 1098-11531 model

				Actions
Predicted = Low	DIMER_A0A2R8YDI1:1098:1153_2hdd_B_1	2hdd	1098-1153	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
3-110	PF25398	CUX1-like, N-terminal tRNA-binding arm	No overlap with loaded model regions
457-529	PF02376	CUT domain	No overlap with loaded model regions
793-862	PF02376	CUT domain	No overlap with loaded model regions
976-1051	PF02376	CUT domain	No overlap with loaded model regions
1098-1154	PF00046	Homeodomain	overlaps 1098-1153