ModCRE DB

Transcription factor

A0A3B3IRM3 - MYT1L

Myelin transcription factor 1 like

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1143 aa

8 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A3B3IRM3_A0A3B3IRM3_HUMAN:1003:1032_2jx1_A_1 ModCRE Homology model TAAAAAAG Region 1003-1032 · 1 3D model Open · Scan
TFS_tr_A0A3B3IRM3_A0A3B3IRM3_HUMAN:1003:1032_2mf8_A_1 ModCRE Homology model CCTAAAACTTTTC Region 1003-1032 · 1 3D model Open · Scan
a0a3b3irm3.af3.0 ModCRE AlphaFold3 model TTTAACAAATAGTGTCAGTGATCTACAAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irm3.af3.1 ModCRE AlphaFold3 model CGTGCCCCCTTGGGGGTTACTCACACTGTA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irm3.af3.2 ModCRE AlphaFold3 model AACATTTGCTGGGAGCCACTCCGAGAGCCA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irm3.af3.3 ModCRE AlphaFold3 model GGCCGCCGCGTGTTGTCCCCTGGGGACGCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irm3.af3.4 ModCRE AlphaFold3 model TTTAACAAATAGTGTCAGTGATCTACAAAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irm3.af3.5 ModCRE AlphaFold3 model TAAAAAACTTTTTAAAAGTTGCAGCCGCAT AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1143 aa
900-979
1003-1032

Region 900-979 0 PWM

Residues
80 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs · 2 summary rows
Templates
2JX1, 2MF8
Sources
Predicted = Low

Region 1003-1032 2 PWM

Residues
30 aa
Domains
PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs
Templates
2JX1, 2MF8
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 2 summary rows
Region 900-9792 models · 2 summary rows
Actions
Predicted = Low TFS_tr_A0A3B3IRM3_A0A3B3IRM3_HUMAN:900:930_2jx1_A_1 2jx1 900-930 View model · PDB
Predicted = Low TFS_tr_A0A3B3IRM3_A0A3B3IRM3_HUMAN:901:979_2mf8_A_1 2mf8 901-979 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 2jx1 900:979 900 930 P:A · DNA:B,C 96.8% / 100.0% 100 View · PDB TFS_tr_A0A3B3IRM3_A0A3B3IRM3_HUMAN:900:930_2jx1_A_1
1 2mf8 900:979 901 979 P:A · DNA:B,C 68.4% / 74.7% 98 View · PDB TFS_tr_A0A3B3IRM3_A0A3B3IRM3_HUMAN:901:979_2mf8_A_1
Region 1003-10322 models
Actions
Predicted = Low TFS_tr_A0A3B3IRM3_A0A3B3IRM3_HUMAN:1003:1032_2jx1_A_1 2jx1 1003-1032 View model · PDB
Predicted = Low TFS_tr_A0A3B3IRM3_A0A3B3IRM3_HUMAN:1003:1032_2mf8_A_1 2mf8 1003-1032 View model · PDB
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a3b3irm3.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irm3.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irm3.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irm3.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irm3.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irm3.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
31-58PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
503-529PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
547-575PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
619-870PF08474Myelin transcription factor 1No overlap with loaded model regions
902-930PF01530Zinc finger, C2HC typeoverlaps 900-979
951-979PF01530Zinc finger, C2HC typeoverlaps 900-979
1005-1032PF01530Zinc finger, C2HC typeoverlaps 1003-1032