ModCRE DB

Transcription factor

A0A3B3IRX0 - MYT1L

Myelin transcription factor 1 like

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 943 aa

11 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE11
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:709:783_2mf8_A_1 ModCRE Homology model TAAAACTTTTTGG Region 709-783 · 1 3D model Open · Scan
TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:753:783_2jx1_A_1 ModCRE Homology model CTATTTAA Region 753-783 · 1 3D model Open · Scan
TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:777:810_6a57_A_1 ModCRE Homology model ATAAAATTTTG Region 777-810 · 1 3D model Open · Scan
TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:803:885_2mf8_A_1 ModCRE Homology model TCCGAAAGTTTTT Region 803-885 · 1 3D model Open · Scan
TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:856:885_2jx1_A_1 ModCRE Homology model TAAAAAAG Region 856-885 · 1 3D model Open · Scan
a0a3b3irx0.af3.0 ModCRE AlphaFold3 model TGCGTGGCCACAGTTTAAAAGTTTCTAGGA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irx0.af3.1 ModCRE AlphaFold3 model ATATGTAAACACCCGTTGTGCACCCCCGGG AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irx0.af3.2 ModCRE AlphaFold3 model CAAAGTACACCTTTGTGGGACCGGTGGGCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irx0.af3.3 ModCRE AlphaFold3 model CGGAAAAAAAGGCACGCGGCGTGCCCCA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irx0.af3.4 ModCRE AlphaFold3 model GCCTTTTTGTACACACAGTGTGTCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3irx0.af3.5 ModCRE AlphaFold3 model TGCGTGGCCACAGTTTAAAAGTTTCTAGGA AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 943 aa
709-885

Region 709-885 5 PWM

Residues
177 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
5 active PDBs · 3 summary rows
Templates
2JX1, 2MF8, 6A57
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 3 summary rows
Region 709-8855 models · 3 summary rows
Actions
Predicted = Low TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:709:783_2mf8_A_1 2mf8 709-783 View model · PDB
Predicted = Low TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:753:783_2jx1_A_1 2jx1 753-783 View model · PDB
Predicted = Low TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:777:810_6a57_A_1 6a57 777-810 View model · PDB
Predicted = Low TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:803:885_2mf8_A_1 2mf8 803-885 View model · PDB
Predicted = Low TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:856:885_2jx1_A_1 2jx1 856-885 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 2jx1 709:783 753 783 P:A · DNA:B,C 96.8% / 100.0% 100 View · PDB TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:753:783_2jx1_A_1
1 2mf8 709:783 709 783 P:A · DNA:B,C 86.7% / 96.0% 100 View · PDB TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:709:783_2mf8_A_1
3 6a57 709:783 777 810 P:A · DNA:B,C 29.4% / 47.1% 25 View · PDB TFS_tr_A0A3B3IRX0_A0A3B3IRX0_HUMAN:777:810_6a57_A_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a3b3irx0.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irx0.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irx0.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irx0.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irx0.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3irx0.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
335-361PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
379-407PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
451-702PF08474Myelin transcription factor 1No overlap with loaded model regions
712-739PF01530Zinc finger, C2HC typeoverlaps 709-885
755-783PF01530Zinc finger, C2HC typeoverlaps 709-885
804-832PF01530Zinc finger, C2HC typeoverlaps 709-885
858-885PF01530Zinc finger, C2HC typeoverlaps 709-885