ModCRE DB

Transcription factor

A0A3B3IS18 - TBX1

T-box transcription factor 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 504 aa

27 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M05822_2.00 NN 70+% CisBP GGAGGTGTGAAT 99.5% identity Open · Scan
MA0805.1 NN 70+% JASPAR AGGTGTGA 92.3% identity Open · Scan
M03988_2.00 NN 70+% CisBP AGGTGTGAA 72.3% identity Open · Scan
Nearest Neighbor (70% - 40%)24
MotifPredictionSourceDNA bindingSupportLogoActions
M01030_2.00 NN 70-40% CisBP TTGACACCTC 62.9% identity Open · Scan
M05798_2.00 NN 70-40% CisBP AAAGGTGTGAAA 62.2% identity Open · Scan
M02498_2.00 NN 70-40% CisBP AGGTGTCA 61.7% identity Open · Scan
MA0689.1 NN 70-40% JASPAR TAGGTGTGAAG 61.3% identity Open · Scan
M02495_2.00 NN 70-40% CisBP TTGACACCTC 61.2% identity Open · Scan
M08044_2.00 NN 70-40% CisBP GCATTCTGGGAATTGTAGTTT 61.2% identity Open · Scan
MA0688.1 NN 70-40% JASPAR AAGGTGTGAAA 61.2% identity Open · Scan
M09650_2.00 NN 70-40% CisBP CCTGTCAACACC 60.8% identity Open · Scan
M02496_2.00 NN 70-40% CisBP AAGGTGTCAA 60.7% identity Open · Scan
MA1565.1 NN 70-40% JASPAR GGAGGTGTGAAA 60.5% identity Open · Scan
M00833_2.00 NN 70-40% CisBP AGGTGTGA 59.5% identity Open · Scan
MA0807.1 NN 70-40% JASPAR AGGTGTGA 59.5% identity Open · Scan
M01029_2.00 NN 70-40% CisBP AGGTGTGA 58.6% identity Open · Scan
M03559_2.00 NN 70-40% CisBP AGGTGTGAAATTTCACACCT 57.0% identity Open · Scan
MA0806.1 NN 70-40% JASPAR AGGTGTGA 57.0% identity Open · Scan
M03554_2.00 NN 70-40% CisBP AGGTGTGAAATTCACACCT 56.3% identity Open · Scan
MA0803.1 NN 70-40% JASPAR AGGTGTGA 56.3% identity Open · Scan
MA1567.1 NN 70-40% JASPAR GAGGTGTGAA 55.5% identity Open · Scan
M03994_2.00 NN 70-40% CisBP AAGGTGTGAA 55.3% identity Open · Scan
M09429_2.00 NN 70-40% CisBP AAGGTGCTA 53.8% identity Open · Scan
MA1566.1 NN 70-40% JASPAR GAGGTGTGAA 53.8% identity Open · Scan
MA0801.1 NN 70-40% JASPAR AGGTGTGA 51.8% identity Open · Scan
M03993_2.00 NN 70-40% CisBP GAGGTGTGAA 51.3% identity Open · Scan
MA0690.1 NN 70-40% JASPAR AAGGTGTGAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 504 aa
118-305

Region 118-305 0 PWM

Residues
188 aa
Domains
PF00907 · T-box
3D models
1 active PDB
Templates
4S0H
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 118-3051 model
Actions
Predicted = Low DIMER_A0A3B3IS18:118:305_4s0h_E_1 4s0h 118-305 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
121-306PF00907T-boxoverlaps 118-305