ModCRE DB

Transcription factor

A0A3B3IS77 - MYT1L

Myelin transcription factor 1 like

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 982 aa

13 Generated PWM 25 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE13
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:900:961_5i50_B_1 ModCRE Homology model CTGCGCACACGTGTGTGCCCGG Region 900-961 · 1 3D model Open · Scan
TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:337:363_2jx1_A_1 ModCRE Homology model TTAAAAAG Region 337-363 · 1 3D model Open · Scan
TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:338:409_2mf8_A_1 ModCRE Homology model TTTAAAAGTTTTA Region 338-409 · 1 3D model Open · Scan
TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:734:764_2jx1_A_1 ModCRE Homology model GTCTTTAA Region 734-764 · 1 3D model Open · Scan
TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:735:813_2mf8_A_1 ModCRE Homology model TAAAACTTTCAGT Region 735-813 · 1 3D model Open · Scan
TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:760:805_6wmi_A_1 ModCRE Homology model TTGTAAAACCGGGG Region 760-805 · 1 3D model Open · Scan
TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:900:961_5i50_B_1 ModCRE Homology model TTGCTCATGATTCGTGCC Region 900-961 · 1 3D model Open · Scan
a0a3b3is77.af3.0 ModCRE AlphaFold3 model TTATAATAAGTACCCTTTTAAGGGTATGAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3is77.af3.1 ModCRE AlphaFold3 model TTTTTGCGACTAATTTTAAAGTACCACTAA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3is77.af3.2 ModCRE AlphaFold3 model AAACGCGCGAATAACCGTGTGACGATGTCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3is77.af3.3 ModCRE AlphaFold3 model TGTTGCTGCACATTTTTGTGAATTCGGGCT AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3is77.af3.4 ModCRE AlphaFold3 model AAAACAGTGTAAAAACGTTGACCTCCTTTC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3is77.af3.5 ModCRE AlphaFold3 model TTATAATAAGTACCCTTTTAAGGGTATGAA AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 982 aa
337-409
734-813
900-961

Region 337-409 2 PWM

Residues
73 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs
Templates
2JX1, 2MF8
Sources
Predicted = Low

Region 734-813 3 PWM

Residues
80 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
3 active PDBs · 3 summary rows
Templates
2JX1, 2MF8, 6WMI
Sources
Predicted = Low

Region 900-961 2 PWM

Residues
62 aa
Domains
No overlapping PFAM annotation recorded
3D models
2 active PDBs · 1 summary row
Templates
5I50
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
25 active PDB models 4 summary rows
Region 337-4092 models
Actions
Predicted = Low TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:337:363_2jx1_A_1 2jx1 337-363 View model · PDB
Predicted = Low TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:338:409_2mf8_A_1 2mf8 338-409 View model · PDB
Region 734-8133 models · 3 summary rows
Actions
Predicted = Low TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:734:764_2jx1_A_1 2jx1 734-764 View model · PDB
Predicted = Low TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:735:813_2mf8_A_1 2mf8 735-813 View model · PDB
Predicted = Low TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:760:805_6wmi_A_1 6wmi 760-805 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 2jx1 734:813 734 764 P:A · DNA:B,C 96.8% / 100.0% 100 View · PDB TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:734:764_2jx1_A_1
1 2mf8 734:813 735 813 P:A · DNA:B,C 68.4% / 74.7% 98 View · PDB TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:735:813_2mf8_A_1
3 6wmi 734:813 760 805 P:A · DNA:E,F 23.9% / 37.0% 31 View · PDB TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:760:805_6wmi_A_1
Region 900-9612 models · 1 summary row
Actions
Predicted = Low DIMER_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:900:961_5i50_B_1 5i50 900-961 View model · PDB
Predicted = Low TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:900:961_5i50_B_1 5i50 900-961 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 5i50 734:813 900 961 P:B · DNA:C,D 27.4% / 53.2% 63 View · PDB TFS_tr_A0A3B3IS77_A0A3B3IS77_HUMAN:900:961_5i50_B_1
Full sequence / unlocalized models18 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a3b3is77.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_dimer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_dimer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_dimer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_dimer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_dimer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_dimer.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_monomer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_monomer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_monomer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_monomer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_monomer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3is77_monomer.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
337-363PF01530Zinc finger, C2HC typeoverlaps 337-409
381-409PF01530Zinc finger, C2HC typeoverlaps 337-409
453-704PF08474Myelin transcription factor 1No overlap with loaded model regions
736-764PF01530Zinc finger, C2HC typeoverlaps 734-813
785-813PF01530Zinc finger, C2HC typeoverlaps 734-813
839-866PF01530Zinc finger, C2HC typeNo overlap with loaded model regions