ModCRE DB

Transcription factor

A0A3B3IT59 - MSL3

MSL complex subunit 3 (Male-specific lethal 3 homolog) (Male-specific lethal-3 homolog 1) (Male-specific lethal-3 protein-like 1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 520 aa

6 Generated PWM 9 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8hxy_M_1 ModCRE Homology model TGGTTCGGGGGGGACGGGCGTAACAGTGAAATTAGACTTTCGGCGACTGAACTGGCGGATTAAAGGCAGGGGTAATGCTTAATCTGACAACT Region 52-106 · 1 3D model Open · Scan
TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8hy0_M_1 ModCRE Homology model TGGTGCTGGGGGCTAACAGGCGATATAAAACGCCCGTGACTAAATCAGCCACAAGTGTTGAGAACTCCAAAGGCACGGTACGTCAGGCACTC Region 52-106 · 1 3D model Open · Scan
TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8jho_M_1 ModCRE Homology model GAACGGGAAAGGGAGGGTTTTTTAGAATTAGCATTGCCGACGCCGACTCTTAGTCATGTACCAGTCCTTTTTGTTGGAGTTCACACTAGCTG Region 52-106 · 1 3D model Open · Scan
a0a3b3it59.af3.0 ModCRE AlphaFold3 model GGAAACGCCGCGG AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3it59.af3.3 ModCRE AlphaFold3 model GGAAACGCCGCGG AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3it59.af3.4 ModCRE AlphaFold3 model GTGTG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 520 aa
52-106

Region 52-106 3 PWM

Residues
55 aa
Domains
PF22732 · MSL3 chromodomain-like
3D models
3 active PDBs · 3 summary rows
Templates
8HXY, 8HY0, 8JHO
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
9 active PDB models 3 summary rows
Region 52-1063 models · 3 summary rows
Actions
Predicted = Low TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8hxy_M_1 8hxy 52-106 View model · PDB
Predicted = Low TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8hy0_M_1 8hy0 52-106 View model · PDB
Predicted = Low TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8jho_M_1 8jho 52-106 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 8jho 442:498 52 106 P:M · DNA:I,J 30.9% / 56.4% 18 View · PDB TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8jho_M_1
2 8hy0 442:498 52 106 P:M · DNA:I,J 30.9% / 56.4% 18 View · PDB TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8hy0_M_1
3 8hxy 442:498 52 106 P:M · DNA:I,J 30.9% / 56.4% 18 View · PDB TFS_tr_A0A3B3IT59_A0A3B3IT59_HUMAN:52:106_8hxy_M_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a3b3it59.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3it59.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3it59.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3it59.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3it59.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3it59.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
11-87PF22732MSL3 chromodomain-likeoverlaps 52-106
160-504PF05712MRGNo overlap with loaded model regions