ModCRE DB

Transcription factor

A0A3B3IUE2 - MYT1L

Myelin transcription factor 1 like

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 973 aa

8 Generated PWM 23 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:835:864_2jx1_A_1 ModCRE Homology model TAAAAAAT Region 835-864 · 1 3D model Open · Scan
TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:835:864_2mf8_A_1 ModCRE Homology model GGTAAAACTTTTC Region 835-864 · 1 3D model Open · Scan
a0a3b3iue2.af3.0 ModCRE AlphaFold3 model GGACCACAAAGGGTGAGGGCATTACTCCAG AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3iue2.af3.1 ModCRE AlphaFold3 model AACCGACGGCAACGAGTCTCCGCCCCGGCC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3iue2.af3.2 ModCRE AlphaFold3 model GTTGAAAATTTTCGTTAATGTCTTAAAAAC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3iue2.af3.3 ModCRE AlphaFold3 model GGACCACAAAGGGTGAGGGCATTACTCCAG AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3iue2.af3.4 ModCRE AlphaFold3 model TTTTTTTTAAGTGTTACCAACGGGGCCCCA AlphaFold3 model · ModCRE PWM Open · Scan
a0a3b3iue2.af3.5 ModCRE AlphaFold3 model GTATACAGTGCGCCCGCGTGGGTGACCCGC AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 973 aa
732-811
835-864

Region 732-811 0 PWM

Residues
80 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
3 active PDBs · 3 summary rows
Templates
2JX1, 2MF8, 6WMI
Sources
Predicted = Low

Region 835-864 2 PWM

Residues
30 aa
Domains
PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs
Templates
2JX1, 2MF8
Sources
Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
23 active PDB models 3 summary rows
Region 732-8113 models · 3 summary rows
Actions
Predicted = Low TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:732:762_2jx1_A_1 2jx1 732-762 View model · PDB
Predicted = Low TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:733:811_2mf8_A_1 2mf8 733-811 View model · PDB
Predicted = Low TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:758:803_6wmi_A_1 6wmi 758-803 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 2jx1 732:811 732 762 P:A · DNA:B,C 96.8% / 100.0% 100 View · PDB TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:732:762_2jx1_A_1
1 2mf8 732:811 733 811 P:A · DNA:B,C 68.4% / 74.7% 98 View · PDB TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:733:811_2mf8_A_1
3 6wmi 732:811 758 803 P:A · DNA:E,F 23.9% / 37.0% 31 View · PDB TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:758:803_6wmi_A_1
Region 835-8642 models
Actions
Predicted = Low TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:835:864_2jx1_A_1 2jx1 835-864 View model · PDB
Predicted = Low TFS_tr_A0A3B3IUE2_A0A3B3IUE2_HUMAN:835:864_2mf8_A_1 2mf8 835-864 View model · PDB
Full sequence / unlocalized models18 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a3b3iue2.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_dimer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_dimer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_dimer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_dimer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_dimer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_dimer.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_monomer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_monomer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_monomer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_monomer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_monomer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3b3iue2_monomer.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
335-361PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
379-407PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
451-702PF08474Myelin transcription factor 1No overlap with loaded model regions
734-762PF01530Zinc finger, C2HC typeoverlaps 732-811
783-811PF01530Zinc finger, C2HC typeoverlaps 732-811
837-864PF01530Zinc finger, C2HC typeoverlaps 835-864