ModCRE DB

Transcription factor

A0A3F2YPB8 - ZNF266

Zinc finger protein 266

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 616 aa

66 Generated PWM 30 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)54
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 59.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 58.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 58.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 58.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 58.4% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 57.6% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 57.6% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 57.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 57.6% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 57.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 55.9% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 55.4% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 54.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 54.5% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 54.3% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 54.3% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 53.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 53.5% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 53.3% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 53.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 52.5% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.4% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 52.4% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.3% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.1% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.6% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 51.3% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 51.3% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 51.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 51.2% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 51.2% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.9% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 50.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 50.2% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 50.0% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 50.0% identity Open · Scan
M02903_2.00 NN 70-40% CisBP ATGCCACGCCCCTTTTTG 50.0% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 50.0% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 50.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.0% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 50.0% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 50.0% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 50.0% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 50.0% identity Open · Scan
ModCRE12
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:138:206_5egb_A_1 ModCRE Homology model CGGGGGCGTACCCAGC Region 138-206 · 1 3D model Open · Scan
TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:138:206_5eh2_F_1 ModCRE Homology model GGGGGGGGGGTGCGCG Region 138-206 · 1 3D model Open · Scan
TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:138:206_5ei9_E_1 ModCRE Homology model CCGGGGGGGGGTGCAC Region 138-206 · 1 3D model Open · Scan
TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:138:219_2i13_A_1 ModCRE Homology model GAAAACCAGAGGGTGGAGAC Region 138-219 · 1 3D model Open · Scan
TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:139:205_5wjq_D_1 ModCRE Homology model AAAAAGAAAGTCCCCC Region 139-205 · 1 3D model Open · Scan
TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:417:526_5ei9_E_1 ModCRE Homology model GGGGAGGGGGGGGGGCA Region 417-526 · 1 3D model Open · Scan
a0a3f2ypb8.af3.0 ModCRE AlphaFold3 model GGCCCGCCCCCCCCCCCCACCCACCCCACC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3f2ypb8.af3.1 ModCRE AlphaFold3 model GGATCGGGGGGGGGGCCGGGGGGGGTCCAG AlphaFold3 model · ModCRE PWM Open · Scan
a0a3f2ypb8.af3.2 ModCRE AlphaFold3 model GGCCCGCCCCCCCCCCCCGCCCACCCCACC AlphaFold3 model · ModCRE PWM Open · Scan
a0a3f2ypb8.af3.3 ModCRE AlphaFold3 model GGGCCGGCCCCCCCCCCCACCCACCCCGGG AlphaFold3 model · ModCRE PWM Open · Scan
a0a3f2ypb8.af3.4 ModCRE AlphaFold3 model GGGCCCCCCCCCCCCTCCTCCCCACCCACG AlphaFold3 model · ModCRE PWM Open · Scan
a0a3f2ypb8.af3.5 ModCRE AlphaFold3 model CGGGCCGCCCCCCCCCCCTCACACCCCCGG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 616 aa
138-219
304-609

Region 138-219 5 PWM

Residues
82 aa
Domains
No overlapping PFAM annotation recorded
3D models
5 active PDBs
Templates
2I13, 5EGB, 5EH2, 5EI9, 5WJQ
Sources
Predicted = Low
Scan this region Show models

Region 304-609 1 PWM

Residues
306 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
7 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
30 active PDB models 6 summary rows
Region 138-2195 models
Actions
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:138:206_5egb_A_1 5egb 138-206 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:138:206_5eh2_F_1 5eh2 138-206 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:138:206_5ei9_E_1 5ei9 138-206 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:138:219_2i13_A_1 2i13 138-219 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:139:205_5wjq_D_1 5wjq 139-205 View model · PDB
Region 304-6097 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:416:465_1llm_D_1 1llm 416-465 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:304:582_5wjq_D_1 5wjq 304-582 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:307:605_7w1m_H_1 7w1m 307-605 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:334:609_5v3j_E_1 5v3j 334-609 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:334:609_5v3m_C_1 5v3m 334-609 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:372:525_2i13_A_1 2i13 372-525 View model · PDB
Predicted = Low TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:417:526_5ei9_E_1 5ei9 417-526 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 277:609 372 525 P:A · DNA:C,D 53.9% / 71.4% 100 View · PDB TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:372:525_2i13_A_1
1 5v3m 277:609 334 609 P:C · DNA:A,B 51.8% / 68.8% 99 View · PDB TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:334:609_5v3m_C_1
2 5v3j 277:609 334 609 P:E · DNA:A,B 51.8% / 68.8% 99 View · PDB TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:334:609_5v3j_E_1
3 5wjq 277:609 304 582 P:D · DNA:A,B 50.5% / 68.5% 99 View · PDB TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:304:582_5wjq_D_1
1 1llm 277:609 416,416 465,465 P:C,D · DNA:A,B 44.0% / 68.0% 57,58 View · PDB DIMER_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:416:465_1llm_D_1
5 7w1m 277:609 307 605 P:H · DNA:F,G 34.7% / 50.0% 92 View · PDB TFS_tr_A0A3F2YPB8_A0A3F2YPB8_HUMAN:307:605_7w1m_H_1
Full sequence / unlocalized models18 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a3f2ypb8.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_dimer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_dimer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_dimer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_dimer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_dimer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_dimer.af3.5-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_monomer.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_monomer.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_monomer.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_monomer.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_monomer.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a3f2ypb8_monomer.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
38-79PF01352KRAB boxNo overlap with loaded model regions
279-301PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
307-329PF00096Zinc finger, C2H2 typeoverlaps 304-609
335-357PF00096Zinc finger, C2H2 typeoverlaps 304-609
363-385PF00096Zinc finger, C2H2 typeoverlaps 304-609
391-413PF00096Zinc finger, C2H2 typeoverlaps 304-609
419-441PF00096Zinc finger, C2H2 typeoverlaps 304-609
447-469PF00096Zinc finger, C2H2 typeoverlaps 304-609
475-497PF00096Zinc finger, C2H2 typeoverlaps 304-609
503-525PF00096Zinc finger, C2H2 typeoverlaps 304-609
531-553PF00096Zinc finger, C2H2 typeoverlaps 304-609
559-581PF00096Zinc finger, C2H2 typeoverlaps 304-609
587-609PF00096Zinc finger, C2H2 typeoverlaps 304-609