ModCRE DB

Transcription factor

A0A411ELH3 - SRY

Sex-determining region Y protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 204 aa

30 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
MA0084.1 NN 70+% JASPAR GTAAACAAT 98.5% identity Open · Scan
Nearest Neighbor (70% - 40%)29
MotifPredictionSourceDNA bindingSupportLogoActions
MA0866.1 NN 70-40% JASPAR AACAATGGTAGTGTT 67.9% identity Open · Scan
MA0870.1 NN 70-40% JASPAR AACAATAACATTGTT 67.0% identity Open · Scan
MA0143.4 NN 70-40% JASPAR AAACAATGGAA 65.4% identity Open · Scan
MA0142.1 NN 70-40% JASPAR CTTTGTTATGCAAAT 64.8% identity Open · Scan
M03508_2.00 NN 70-40% CisBP AACAATAACATTGTT 64.5% identity Open · Scan
MA1152.1 NN 70-40% JASPAR CTATTGTTTT 64.5% identity Open · Scan
MA1562.1 NN 70-40% JASPAR CCGAACAATG 64.1% identity Open · Scan
M03983_2.00 NN 70-40% CisBP AAACAATTTCAGTGTTT 62.1% identity Open · Scan
M03979_2.00 NN 70-40% CisBP AAACAATAACATTGTTT 61.9% identity Open · Scan
M09694_2.00 NN 70-40% CisBP AACAATGGAC 61.0% identity Open · Scan
M03533_2.00 NN 70-40% CisBP AACAATTGCATTGTT 55.0% identity Open · Scan
M09408_2.00 NN 70-40% CisBP TTTTGTTTT 55.0% identity Open · Scan
MA0869.1 NN 70-40% JASPAR AACAATTTCAGTGTT 53.7% identity Open · Scan
M09410_2.00 NN 70-40% CisBP TCCTTTGTTCTC 53.2% identity Open · Scan
M00204_2.00 NN 70-40% CisBP AAAACAAT 52.6% identity Open · Scan
M00212_2.00 NN 70-40% CisBP GAACAATA 52.0% identity Open · Scan
M05892_2.00 NN 70-40% CisBP AAACAATAGA 52.0% identity Open · Scan
MA0515.1 NN 70-40% JASPAR CCATTGTTTT 52.0% identity Open · Scan
MA1120.1 NN 70-40% JASPAR AAACAATGGCA 52.0% identity Open · Scan
MA0867.1 NN 70-40% JASPAR GAACAATTGCAGTGTT 51.9% identity Open · Scan
M03516_2.00 NN 70-40% CisBP AACAATGTTCATTGTT 51.2% identity Open · Scan
MA1561.1 NN 70-40% JASPAR ACCGAACAATG 51.2% identity Open · Scan
MA1563.1 NN 70-40% JASPAR CACAATGC 51.2% identity Open · Scan
M00197_2.00 NN 70-40% CisBP AAAACAAT 50.6% identity Open · Scan
M00201_2.00 NN 70-40% CisBP ATTGTTCTGC 50.6% identity Open · Scan
M05754_2.00 NN 70-40% CisBP CATTGTTC 50.6% identity Open · Scan
MA0077.1 NN 70-40% JASPAR CCATTGTTC 50.6% identity Open · Scan
MA0868.1 NN 70-40% JASPAR AACAATGTGCAGTGTT 50.6% identity Open · Scan
M02488_2.00 NN 70-40% CisBP CATTGTTTTC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 204 aa
56-140

Region 56-140 0 PWM

Residues
85 aa
Domains
PF00505 · HMG (high mobility group) box
3D models
1 active PDB
Templates
1J46
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 56-1401 model
Actions
Predicted = Low TFS_A0A411ELH3:56:140_1j46_A_1 1j46 56-140 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
60-128PF00505HMG (high mobility group) boxoverlaps 56-140