Region 49-359 0 PWM
- Residues
- 311 aa
- Domains
- PF00554 · Rel homology DNA-binding domain PF16179 · Rel homology dimerisation domain
- 3D models
- 1 active PDB
- Templates
- 1A3Q
- Sources
- Structure model
Transcription factor
A0A494C1E9 - NFKB1
Nuclear factor kappa B subunit 1
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 511 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
511 aa
49-359
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 49-3591 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_A0A494C1E9:49:359_1a3q_B_1 | 1a3q | 49-359 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 52-250 | PF00554 | Rel homology DNA-binding domain | overlaps 49-359 |
| 259-360 | PF16179 | Rel homology dimerisation domain | overlaps 49-359 |