ModCRE DB

Transcription factor

A0A5B9RIM3 - NR3C1

Glucocorticoid receptor (Nuclear receptor subfamily 3 group C member 1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 777 aa

21 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0113.1 NN 70+% JASPAR GGGAACATTATGTCCTAA 99.8% identity Open · Scan
M07987_2.00 NN 70+% CisBP GCCCAGAACATTCTGTTCCCT 99.7% identity Open · Scan
M05886_2.00 NN 70+% CisBP AGTACATTTTGTTCT 88.1% identity Open · Scan
M09609_2.00 NN 70+% CisBP CCAGGAACAG 83.3% identity Open · Scan
Nearest Neighbor (70% - 40%)17
MotifPredictionSourceDNA bindingSupportLogoActions
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 56.9% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 56.9% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 56.9% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 56.9% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 56.9% identity Open · Scan
M11192_2.00 NN 70-40% CisBP GGGGTCACG 53.5% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 52.9% identity Open · Scan
M02409_2.00 NN 70-40% CisBP GAGATCAA 52.7% identity Open · Scan
MA0007.1 NN 70-40% JASPAR ATAAGAACACCCTGTACCCGCC 52.4% identity Open · Scan
MA0007.3 NN 70-40% JASPAR GGGAACACGGTGTACCC 52.4% identity Open · Scan
MA0007.2 NN 70-40% JASPAR AAGAACAGAATGTTC 52.3% identity Open · Scan
M06432_2.00 NN 70-40% CisBP AAAAATCAAAGGT 51.3% identity Open · Scan
M08226_2.00 NN 70-40% CisBP CAAGGTCA 51.3% identity Open · Scan
M05599_2.00 NN 70-40% CisBP AAAGGTCAA 50.7% identity Open · Scan
MA1535.1 NN 70-40% JASPAR CGAGGTCAC 50.7% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 50.1% identity Open · Scan
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 777 aa
417-492

Region 417-492 0 PWM

Residues
76 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
5CBY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 417-4921 model
Actions
Predicted = Low DIMER_A0A5B9RIM3:417:492_5cby_A_1 5cby 417-492 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
26-401PF02155Glucocorticoid receptorNo overlap with loaded model regions
420-487PF00105Double treble clef zinc finger, C4 typeoverlaps 417-492
558-735PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions