ModCRE DB

Transcription factor

A0A669KB50 - CXXC1

CXXC-type zinc finger protein 1 (CpG-binding protein) (PHD finger and CXXC domain-containing protein 1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 100 aa

2 Generated PWM 8 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE2
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_A0A669KB50_A0A669KB50_HUMAN:59:89_4mhg_A_1 ModCRE Homology model AATTTTAAATTAA Region 59-89 · 1 3D model Open · Scan
TFS_tr_A0A669KB50_A0A669KB50_HUMAN:59:89_8e67_A_1 ModCRE Homology model TAAAATTATTTTAT Region 59-89 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 100 aa
59-89

Region 59-89 2 PWM

Residues
31 aa
Domains
PF00628 · PHD-finger
3D models
2 active PDBs · 2 summary rows
Templates
4MHG, 8E67
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models 2 summary rows
Region 59-892 models · 2 summary rows
Actions
Predicted = Low TFS_tr_A0A669KB50_A0A669KB50_HUMAN:59:89_4mhg_A_1 4mhg 59-89 View model · PDB
Predicted = Low TFS_tr_A0A669KB50_A0A669KB50_HUMAN:59:89_8e67_A_1 8e67 59-89 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 4mhg 28:73 59 89 P:A · DNA:B,C 32.3% / 58.1% 34 View · PDB TFS_tr_A0A669KB50_A0A669KB50_HUMAN:59:89_4mhg_A_1
2 8e67 28:73 59 89 P:A · DNA:B,C 32.3% / 58.1% 33 View · PDB TFS_tr_A0A669KB50_A0A669KB50_HUMAN:59:89_8e67_A_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a669kb50.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a669kb50.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a669kb50.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a669kb50.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a669kb50.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a669kb50.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
29-73PF00628PHD-fingeroverlaps 59-89