ModCRE DB

Transcription factor

A0A7I2PK40

merged

Organism unknown

13 Generated PWM 13 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE13
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_5sy7_B_1 ModCRE Homology model CGCCCGGCGGGGTGTACT Region 28-171 · 1 3D model Open · Scan
DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osk_N_1 ModCRE Homology model AAGCGCTAAACAATATGGCATTATCAGGGTGATTACCACTAGTCTTACATGGGCACTAAAAGAGAAAGACAAGCCGATAATTTAAATACAATATGGT Region 30-163 · 1 3D model Open · Scan
DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osl_N_1 ModCRE Homology model ATAGGGGATCGATCCAATGGGGCAGTTTCTGAGGTTAACGAGGAGAAGCGGAGGAGTCGTCAGAGCAGCGCTGTACAAATTTTCTTCACCAAATTTTGGGC Region 30-163 · 1 3D model Open · Scan
DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:75_4h10_A_1 ModCRE Homology model CGCCCACGCGGGCA Region 30-75 · 1 3D model Open · Scan
DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:31:273_5nj8_A_1 ModCRE Homology model CTCTCACTGACC Region 31-273 · 1 3D model Open · Scan
DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:35:273_5v0l_B_1 ModCRE Homology model TGTCACACCCA Region 35-273 · 1 3D model Open · Scan
TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_4zpk_B_1 ModCRE Homology model CTGCACACGCGGGGG Region 28-171 · 1 3D model Open · Scan
TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_4zpr_B_1 ModCRE Homology model CTGTACACGCAGCGCCG Region 28-171 · 1 3D model Open · Scan
TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_5sy7_B_1 ModCRE Homology model CGCCCGGCGGTGTGTACT Region 28-171 · 1 3D model Open · Scan
TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osk_N_1 ModCRE Homology model ACAATTAATAATATCAACCATGGGAATCCTAAGAACGAGCCAAAGTCTGAGACTGACAAGCCCCCCGAAATAGAAATAGAAATATTGTTTAACGCGA Region 30-163 · 1 3D model Open · Scan
TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osl_N_1 ModCRE Homology model ACAATTATACGACCCAAATAGAACAGAATTAATAATTAGCCAGAACAAAAATTAACCAGCTGAACAAAACATGAACTTGTCTAAGGGACCCGAACATCATA Region 30-163 · 1 3D model Open · Scan
TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:31:273_5nj8_A_1 ModCRE Homology model CTCTCAGTGACC Region 31-273 · 1 3D model Open · Scan
TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:35:273_5v0l_B_1 ModCRE Homology model TGACACACCCT Region 35-273 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

Region 28-273 13 PWM

Residues
246 aa
Domains
No overlapping PFAM annotation recorded
3D models
13 active PDBs · 10 summary rows
Templates
4H10, 4ZPK, 4ZPR, 5NJ8, 5SY7, 5V0L, 8OSK, 8OSL
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
13 active PDB models 10 summary rows
Region 28-27313 models · 10 summary rows
Actions
Predicted = Low DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_5sy7_B_1 5sy7 28-171 View model · PDB
Predicted = Low DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osk_N_1 8osk 30-163 View model · PDB
Predicted = Low DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osl_N_1 8osl 30-163 View model · PDB
Predicted = Low DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:75_4h10_A_1 4h10 30-75 View model · PDB
Predicted = Low DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:31:273_5nj8_A_1 5nj8 31-273 View model · PDB
Predicted = Low DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:35:273_5v0l_B_1 5v0l 35-273 View model · PDB
Predicted = Low TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_4zpk_B_1 4zpk 28-171 View model · PDB
Predicted = Low TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_4zpr_B_1 4zpr 28-171 View model · PDB
Predicted = Low TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_5sy7_B_1 5sy7 28-171 View model · PDB
Predicted = Low TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osk_N_1 8osk 30-163 View model · PDB
Predicted = Low TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osl_N_1 8osl 30-163 View model · PDB
Predicted = Low TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:31:273_5nj8_A_1 5nj8 31-273 View model · PDB
Predicted = Low TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:35:273_5v0l_B_1 5v0l 35-273 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 5nj8 28:273 31,114 273,171 P:A,B · DNA:E,F 49.4% / 59.3% 100,33 View · PDB TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:31:273_5nj8_A_1
1 5nj8 28:273 31,114 273,171 P:A,B · DNA:E,F 49.4% / 59.3% 100,33 View · PDB DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:31:273_5nj8_A_1
2 5v0l 28:273 30,35 171,273 P:A,B · DNA:C,D 44.8% / 56.5% 65,100 View · PDB TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:35:273_5v0l_B_1
2 5v0l 28:273 30,35 171,273 P:A,B · DNA:C,D 44.8% / 56.5% 65,100 View · PDB DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:35:273_5v0l_B_1
3 5sy7 28:273 114,28 171,171 P:A,B · DNA:C,D 31.0% / 45.8% 21,43 View · PDB TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_5sy7_B_1
3 5sy7 28:273 114,28 171,171 P:A,B · DNA:C,D 31.0% / 45.8% 21,43 View · PDB DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:28:171_5sy7_B_1
4 8osl 28:273 30,30 163,74 P:N,P · DNA:I,J 28.9% / 48.1% 35,90 View · PDB TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osl_N_1
4 8osl 28:273 30,30 163,74 P:N,P · DNA:I,J 28.9% / 48.1% 35,90 View · PDB DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osl_N_1
5 8osk 28:273 113,30 159,163 P:M,N · DNA:I,J 28.9% / 48.1% 14,35 View · PDB TFS_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osk_N_1
5 8osk 28:273 113,30 159,163 P:M,N · DNA:I,J 28.9% / 48.1% 14,35 View · PDB DIMER_tr_A0A7I2PK40_A0A7I2PK40_HUMAN:30:163_8osk_N_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Imported domain tags5
HLHPASPAS_3PAS_4PAS_9