ModCRE DB

Transcription factor

A0A7P0N7C4 - ZNF142

Zinc finger protein 142

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1887 aa

11 Generated PWM 12 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE11
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1763:1811_1llm_C_1 ModCRE Homology model GCGCGGCCCCGA Region 1763-1811 · 1 3D model Open · Scan
TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1620:1843_5wjq_D_1 ModCRE Homology model GCCCCCCGACACGCCCTCTTGTTCTCGG Region 1620-1843 · 1 3D model Open · Scan
TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1623:1856_5v3j_E_1 ModCRE Homology model AGGCCTCCCACCGACCTAGGGC Region 1623-1856 · 1 3D model Open · Scan
TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1623:1856_5v3m_C_1 ModCRE Homology model CGAGCCTCCCCCATCCCCCCCC Region 1623-1856 · 1 3D model Open · Scan
TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1639:1787_2i13_A_1 ModCRE Homology model ACACTAGGCCGGCAGCGGGCA Region 1639-1787 · 1 3D model Open · Scan
a0a7p0n7c4.af3.0 ModCRE AlphaFold3 model GGGGGGGTGTCCCCAGGGCCCCCCCCTTTG AlphaFold3 model · ModCRE PWM Open · Scan
a0a7p0n7c4.af3.1 ModCRE AlphaFold3 model GGGGGGGTGTCCCCAGGGCCCCCCCCTTTG AlphaFold3 model · ModCRE PWM Open · Scan
a0a7p0n7c4.af3.2 ModCRE AlphaFold3 model ACAATCGCGCCGAGCGGGGCTGCTAAGCTT AlphaFold3 model · ModCRE PWM Open · Scan
a0a7p0n7c4.af3.3 ModCRE AlphaFold3 model ACCCGGGGCCGGCTCTGGGGGTTTGCCCCG AlphaFold3 model · ModCRE PWM Open · Scan
a0a7p0n7c4.af3.4 ModCRE AlphaFold3 model CCCGGGCCGGCCCCCCTGGGCTTTTTTTGA AlphaFold3 model · ModCRE PWM Open · Scan
a0a7p0n7c4.af3.5 ModCRE AlphaFold3 model GGGGGGGCCCTCTTCTCCGCCGAGCCCGCG AlphaFold3 model · ModCRE PWM Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1887 aa
1620-1856

Region 1620-1856 5 PWM

Residues
237 aa
Domains
PF23611 · C2H2 zinc finger PF23611 · C2H2 zinc finger PF23611 · C2H2 zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
12 active PDB models 6 summary rows
Region 1620-18566 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1763:1811_1llm_C_1 1llm 1763-1811 View model · PDB
Predicted = Low TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1620:1843_5wjq_D_1 5wjq 1620-1843 View model · PDB
Predicted = Low TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1623:1843_7w1m_H_1 7w1m 1623-1843 View model · PDB
Predicted = Low TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1623:1856_5v3j_E_1 5v3j 1623-1856 View model · PDB
Predicted = Low TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1623:1856_5v3m_C_1 5v3m 1623-1856 View model · PDB
Predicted = Low TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1639:1787_2i13_A_1 2i13 1639-1787 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
3 2i13 1620:1856 1639 1787 P:A · DNA:C,D 40.3% / 53.7% 96 View · PDB TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1639:1787_2i13_A_1
2 5wjq 1620:1856 1620 1843 P:D · DNA:A,B 33.5% / 44.2% 79 View · PDB TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1620:1843_5wjq_D_1
1 7w1m 1620:1856 1623 1843 P:H · DNA:F,G 33.3% / 47.6% 68 View · PDB TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1623:1843_7w1m_H_1
1 1llm 1620:1856 1763,1763 1811,1811 P:C,D · DNA:A,B 32.7% / 51.0% 56,57 View · PDB DIMER_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1763:1811_1llm_C_1
4 5v3m 1620:1856 1623 1856 P:C · DNA:A,B 30.3% / 46.6% 84 View · PDB TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1623:1856_5v3m_C_1
5 5v3j 1620:1856 1623 1856 P:E · DNA:A,B 30.3% / 46.6% 84 View · PDB TFS_tr_A0A7P0N7C4_A0A7P0N7C4_HUMAN:1623:1856_5v3j_E_1
Full sequence / unlocalized models6 models
SourceModelTemplateResidues modeledActions
Predicted = Lowa0a7p0n7c4.af3.0-Full sequence / not localizedView model · PDB
Predicted = Lowa0a7p0n7c4.af3.1-Full sequence / not localizedView model · PDB
Predicted = Lowa0a7p0n7c4.af3.2-Full sequence / not localizedView model · PDB
Predicted = Lowa0a7p0n7c4.af3.3-Full sequence / not localizedView model · PDB
Predicted = Lowa0a7p0n7c4.af3.4-Full sequence / not localizedView model · PDB
Predicted = Lowa0a7p0n7c4.af3.5-Full sequence / not localizedView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
392-411PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
771-805PF23574Zinc finger protein 142 C2H2 domainNo overlap with loaded model regions
1304-1327PF27528ZNF142, C2H2-type zinc fingerNo overlap with loaded model regions
1371-1397PF23612ZN142 C2H2 zinc fingerNo overlap with loaded model regions
1400-1424PF23611C2H2 zinc fingerNo overlap with loaded model regions
1428-1454PF23612ZN142 C2H2 zinc fingerNo overlap with loaded model regions
1624-1649PF23611C2H2 zinc fingeroverlaps 1620-1856
1652-1677PF23611C2H2 zinc fingeroverlaps 1620-1856
1680-1705PF23611C2H2 zinc fingeroverlaps 1620-1856
1736-1759PF00096Zinc finger, C2H2 typeoverlaps 1620-1856
1765-1787PF00096Zinc finger, C2H2 typeoverlaps 1620-1856