Region 145-252 0 PWM
- Residues
- 108 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 5EGB
- Sources
- Structure model
Transcription factor
A0A7P0Q1F0 - ZNF423
Zinc finger protein 423 (Olf1/EBF-associated zinc finger protein) (Smad- and Olf-interacting zinc finger protein)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1292 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M10151_2.00 | Known | CisBP | GCACCCTTGGGTGC | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
1292 aa
145-252
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 145-2521 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_A0A7P0Q1F0:145:252_5egb_A_1 | 5egb | 145-252 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 146-168 | PF00096 | Zinc finger, C2H2 type | overlaps 145-252 |
| 202-224 | PF00096 | Zinc finger, C2H2 type | overlaps 145-252 |
| 230-252 | PF00096 | Zinc finger, C2H2 type | overlaps 145-252 |
| 488-511 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 640-662 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 700-723 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 938-962 | PF13912 | C2H2-type zinc finger | No overlap with loaded model regions |
| 966-991 | PF13912 | C2H2-type zinc finger | No overlap with loaded model regions |
| 1129-1151 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |