Region 1-411 0 PWM
- Residues
- 411 aa
- Domains
- PF09271 · LAG1, DNA binding PF09270 · Beta-trefoil DNA-binding domain PF20144 · TIG domain
- 3D models
- 1 active PDB
- Templates
- 4J2X
- Sources
- Structure model
Transcription factor
A0A7P0T947 - RBPJ
Recombining binding protein suppressor of hairless (J kappa-recombination signal-binding protein) (RBP-J kappa)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 463 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
463 aa
1-411
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 1-4111 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_A0A7P0T947:1:411_4j2x_A_1 | 4j2x | 1-411 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 13-143 | PF09271 | LAG1, DNA binding | overlaps 1-411 |
| 171-293 | PF09270 | Beta-trefoil DNA-binding domain | overlaps 1-411 |
| 319-409 | PF20144 | TIG domain | overlaps 1-411 |