ModCRE DB

Transcription factor

A0A804HJN2 - PPARG

Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 181 aa

86 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M11139_2.00 NN 70+% CisBP AAGTAGGTCACCGTGACCTACTT 99.4% identity Open · Scan
MA0065.1 NN 70+% JASPAR CCAGGGGTCAAAGGTCATCG 99.4% identity Open · Scan
MA0065.2 NN 70+% JASPAR GTAGGGCAAAGGTCA 97.2% identity Open · Scan
M05584_2.00 NN 70+% CisBP AGAGGTCACGACCTCT 80.2% identity Open · Scan
MA1550.1 NN 70+% JASPAR AGGGGTCAAAGGTCAA 80.2% identity Open · Scan
MA1148.1 NN 70+% JASPAR ATGTAGGTCAAAGGTCAT 79.5% identity Open · Scan
Nearest Neighbor (70% - 40%)80
MotifPredictionSourceDNA bindingSupportLogoActions
M02392_2.00 NN 70-40% CisBP GAGGTCAA 63.0% identity Open · Scan
M03424_2.00 NN 70-40% CisBP AAAGGTCACCAGAGGTCA 63.0% identity Open · Scan
M05563_2.00 NN 70-40% CisBP AAAAGGTCAA 63.0% identity Open · Scan
MA0857.1 NN 70-40% JASPAR AAAGGTCAAAAGGTCA 63.0% identity Open · Scan
MA1552.1 NN 70-40% JASPAR AAGGTCATGACCTT 63.0% identity Open · Scan
MA1531.1 NN 70-40% JASPAR GGGTCAGTAGGTCAG 62.8% identity Open · Scan
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 61.9% identity Open · Scan
M03432_2.00 NN 70-40% CisBP AAAGGTCAAGAGAGGTCA 61.6% identity Open · Scan
MA0159.1 NN 70-40% JASPAR AGGTCACGGAGAGGTCA 61.6% identity Open · Scan
MA0859.1 NN 70-40% JASPAR AAGGTCAAAAGGTCAA 61.6% identity Open · Scan
MA1553.1 NN 70-40% JASPAR AAGGTCATGACCTT 61.6% identity Open · Scan
M05660_2.00 NN 70-40% CisBP GATGTGGGTCAGTGGGTCAG 61.2% identity Open · Scan
MA1532.1 NN 70-40% JASPAR GGGTTAGTGGGTCAT 61.2% identity Open · Scan
M09277_2.00 NN 70-40% CisBP GGGGGATCAAGAGGTCAAGG 60.6% identity Open · Scan
M02393_2.00 NN 70-40% CisBP AGAGGTCAC 60.2% identity Open · Scan
M11192_2.00 NN 70-40% CisBP GGGGTCACG 59.7% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 59.2% identity Open · Scan
M03421_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 58.3% identity Open · Scan
M03435_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 58.3% identity Open · Scan
MA0855.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 58.3% identity Open · Scan
M02400_2.00 NN 70-40% CisBP GGGGTCAC 57.6% identity Open · Scan
MA0856.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 57.6% identity Open · Scan
MA1541.1 NN 70-40% JASPAR GTCAAGTTCAAGGTCAA 57.5% identity Open · Scan
M00812_2.00 NN 70-40% CisBP AGAGGTCACG 56.9% identity Open · Scan
M05599_2.00 NN 70-40% CisBP AAAGGTCAA 56.9% identity Open · Scan
MA1535.1 NN 70-40% JASPAR CGAGGTCAC 56.9% identity Open · Scan
MA1111.1 NN 70-40% JASPAR CAAAGGTCAAA 56.7% identity Open · Scan
M03392_2.00 NN 70-40% CisBP AAGGTCAACTAAAGGTCA 56.6% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 56.1% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 56.1% identity Open · Scan
M05621_2.00 NN 70-40% CisBP TAGGTCATGACCTA 55.6% identity Open · Scan
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 55.5% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 55.5% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 55.5% identity Open · Scan
M00822_2.00 NN 70-40% CisBP GAGGTCAC 55.1% identity Open · Scan
M05661_2.00 NN 70-40% CisBP GGGGTCAAAGGTCAG 55.1% identity Open · Scan
MA0017.1 NN 70-40% JASPAR TGACCTTTGAACCT 55.1% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 55.0% identity Open · Scan
M02405_2.00 NN 70-40% CisBP AGAGGTCAGT 54.4% identity Open · Scan
MA0160.1 NN 70-40% JASPAR AAGGTCAC 54.3% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 54.1% identity Open · Scan
MA0141.1 NN 70-40% JASPAR AGCTCAAGGTCA 54.1% identity Open · Scan
MA0141.3 NN 70-40% JASPAR TCAAGGTCATA 54.1% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 54.1% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 53.9% identity Open · Scan
MA1151.1 NN 70-40% JASPAR ATAAGTAGGTCA 53.6% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 53.5% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 53.4% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 53.4% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 53.4% identity Open · Scan
M02413_2.00 NN 70-40% CisBP CGAGATCAA 53.2% identity Open · Scan
M00820_2.00 NN 70-40% CisBP TAGGTCACC 53.1% identity Open · Scan
M03927_2.00 NN 70-40% CisBP GAAACTAGAGCA 53.1% identity Open · Scan
MA1150.1 NN 70-40% JASPAR AATTAGGTCAC 53.1% identity Open · Scan
M00689_2.00 NN 70-40% CisBP AAAGATCAA 52.7% identity Open · Scan
MA0677.1 NN 70-40% JASPAR GAGGTCAAAGGTCA 52.6% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 52.6% identity Open · Scan
MA1110.1 NN 70-40% JASPAR TCAATGACCTA 52.2% identity Open · Scan
M02411_2.00 NN 70-40% CisBP AGGACATC 52.0% identity Open · Scan
M02418_2.00 NN 70-40% CisBP CGGAAGCAAA 51.9% identity Open · Scan
M09296_2.00 NN 70-40% CisBP TCAAGGTCA 51.8% identity Open · Scan
MA0643.1 NN 70-40% JASPAR TCAAGGTCAT 51.8% identity Open · Scan
M03928_2.00 NN 70-40% CisBP ATGTAGGTCAAG 51.6% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 51.3% identity Open · Scan
M09309_2.00 NN 70-40% CisBP AGGTCAGGGTGACCT 51.3% identity Open · Scan
MA0112.1 NN 70-40% JASPAR CCAGGTCACCGTGACCCC 51.3% identity Open · Scan
MA0592.1 NN 70-40% JASPAR CCAAGGTCACA 51.2% identity Open · Scan
MA0592.2 NN 70-40% JASPAR TTCAAGGTCAT 51.2% identity Open · Scan
MA0074.1 NN 70-40% JASPAR GGGTCAACGAGTTCA 50.7% identity Open · Scan
MA0693.1 NN 70-40% JASPAR GAGTTCATTGAGTTCA 50.7% identity Open · Scan
M03930_2.00 NN 70-40% CisBP AACTAGAGCAC 50.6% identity Open · Scan
M09283_2.00 NN 70-40% CisBP TGAGGTCAAAAAAGTTCAG 50.6% identity Open · Scan
MA1533.1 NN 70-40% JASPAR ATGAACTCGATGAACTC 50.6% identity Open · Scan
M02388_2.00 NN 70-40% CisBP GAGGTCA 50.5% identity Open · Scan
M00686_2.00 NN 70-40% CisBP AGTGATCA 50.0% identity Open · Scan
M02409_2.00 NN 70-40% CisBP GAGATCAA 50.0% identity Open · Scan
M03426_2.00 NN 70-40% CisBP GGGGTCAAAGTCCAAT 50.0% identity Open · Scan
M06432_2.00 NN 70-40% CisBP AAAAATCAAAGGT 50.0% identity Open · Scan
M08226_2.00 NN 70-40% CisBP CAAGGTCA 50.0% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 181 aa
105-180

Region 105-180 0 PWM

Residues
76 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1A6Y
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 105-1801 model
Actions
Predicted = Low DIMER_A0A804HJN2:105:180_1a6y_B_1 1a6y 105-180 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-78PF12577PPAR gamma N-terminal regionNo overlap with loaded model regions
108-174PF00105Double treble clef zinc finger, C4 typeoverlaps 105-180